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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">CP</journal-id><journal-title-group>
    <journal-title>Climate of the Past</journal-title>
    <abbrev-journal-title abbrev-type="publisher">CP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Clim. Past</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1814-9332</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/cp-15-335-2019</article-id><title-group><article-title>Harmonising  plant functional type distributions for<?xmltex \hack{\break}?> evaluating Earth system
models</article-title><alt-title>Harmonising plant functional type distributions</alt-title>
      </title-group><?xmltex \runningtitle{Harmonising plant functional type distributions}?><?xmltex \runningauthor{A.~Dallmeyer et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Dallmeyer</surname><given-names>Anne</given-names></name>
          <email>anne.dallmeyer@mpimet.mpg.de</email>
        <ext-link>https://orcid.org/0000-0002-3270-610X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Claussen</surname><given-names>Martin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6225-5488</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Brovkin</surname><given-names>Victor</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6420-3198</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Max Planck Institute for Meteorology, Bundesstrasse 53, 20146 Hamburg,
Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Meteorological Institute, Centrum für Erdsystemforschung und
Nachhaltigkeit (CEN), Universität Hamburg,<?xmltex \hack{\break}?> Bundesstrasse 55, 20146
Hamburg, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Anne Dallmeyer (anne.dallmeyer@mpimet.mpg.de)</corresp></author-notes><pub-date><day>18</day><month>February</month><year>2019</year></pub-date>
      
      <volume>15</volume>
      <issue>1</issue>
      <fpage>335</fpage><lpage>366</lpage>
      <history>
        <date date-type="received"><day>28</day><month>March</month><year>2018</year></date>
           <date date-type="rev-request"><day>6</day><month>April</month><year>2018</year></date>
           <date date-type="rev-recd"><day>4</day><month>December</month><year>2018</year></date>
           <date date-type="accepted"><day>24</day><month>January</month><year>2019</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019.html">This article is available from https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019.html</self-uri><self-uri xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019.pdf">The full text article is available as a PDF file from https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019.pdf</self-uri>
      <abstract>
    <p id="d1e108">Dynamic vegetation models simulate global vegetation in terms of
fractional coverage of a few plant functional types (PFTs). Although these
models often share the same concept, they differ with respect to the number
and kind of PFTs, complicating the comparability of simulated vegetation
distributions. Pollen-based vegetation reconstructions are initially only
available in the form of time series of individual taxa that are not
distinguished in the models. Thus, to evaluate simulated vegetation
distributions, the modelling results and pollen-based vegetation
reconstructions have to be converted into a comparable format. The classical
approach is the method of biomisation, but hitherto PFT-based biomisation
methods were only available for individual models. We introduce and evaluate
a simple, universally applicable technique to harmonise PFT distributions by
assigning them into nine mega-biomes, using only assumptions on the minimum
PFT cover fractions and few bioclimatic constraints (based on the
2 m temperature). These constraints mainly follow the limitation rules used in
the classical biome models (here BIOME4). We test the method for six
state-of-the-art dynamic vegetation models that are included in Earth system
models based on pre-industrial, mid-Holocene and Last Glacial Maximum
simulations. The method works well, independent of the spatial resolution or
the complexity of the models. Large biome belts (such as tropical forest) are
generally better represented than regionally confined biomes (warm–temperate
forest, savanna). The comparison with biome distributions inferred via the
classical biomisation approach of forcing biome models (here BIOME1) with
the simulated climate states shows that the PFT-based biomisation is even
able to keep up with the classical method. However, as the new method
considers the PFT distributions actually calculated by the Earth system models, it allows for a direct comparison and evaluation of simulated
vegetation distributions which the classical method cannot do. Thereby, the
new method provides a powerful tool for the evaluation of Earth system models
in general.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e118">Within dynamic global vegetation models (DGVMs), the natural vegetation
distribution is usually represented in the form of plant functional types
(PFTs); i.e. plants are grouped with regard to their physiology and
physiognomy (Prentice et al., 2007). These PFTs differ with respect to
phenology, albedo, morphological and photosynthetic parameters and are
usually constrained by an individual bioclimatic range of tolerance defined
by temperature thresholds. These thresholds represent the cold resistance,
chilling and heat requirements of the plants and determine the area where
the PFTs can be established.</p>
      <p id="d1e121">In most DGVMs, a “mosaic” approach is used; i.e. each grid box of the land
surface is split into separate parts for a non-vegetated and a vegetated
fraction that is further tiled in mosaics, taking subgrid-scale
heterogeneity into account. Thus, several PFTs can cover the same grid cell
and compete for space via their net primary productivity (e.g. Sitch et al.,
2003; Krinner et al., 2005; Reick et al., 2013). Non-vegetated area
(seasonally bare soil or permanently bare ground) is produced where plant
productivity is too low.</p>
      <?pagebreak page336?><p id="d1e124"><?xmltex \hack{\newpage}?>Although the main principles for the calculation of PFT distributions are
similar among most DGVMs, they vary regarding the number and kind of PFTs
used to represent the global vegetation. Natural (non-anthropogenic) PFTs
range from 2 in, e.g. VECODE (for definition of the acronyms of the DGVMs, see Table 1),
to 10 in, e.g. LPJ and ORCHIDEE (Table 1). Even within the same
model, PFT variety can differ between individual simulations, e.g. due to the
inclusion of land-use types. These differences among the simulations and
models prohibit the intermodel comparability of simulated global vegetation
distributions and the comparability with pollen-based biome reconstructions.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e131">The PFTs used in the different state-of-the-art dynamic global
vegetation models. These are the Jena Scheme for Biosphere Atmosphere Coupling
in Hamburg (JSBACH), the Lund–Potsdam–Jena model (LPJ), the Organising Carbon
and Hydrology In Dynamic Ecosystems model (ORCHIDEE), the Community Land Model's
dynamic global vegetation model (CLM-DGVM), the Top-down Representation of Interactive
Foliage and Flora Including Dynamics (TRIFFID) model and the Vegetation Continuous Description model (VECODE).</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.94}[.94]?><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="51.214961pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="93.894094pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="56.905512pt"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="85.358268pt"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">PFT class</oasis:entry>
         <oasis:entry colname="col2">JSBACH</oasis:entry>
         <oasis:entry colname="col3">LPJ</oasis:entry>
         <oasis:entry colname="col4">ORCHIDEE</oasis:entry>
         <oasis:entry colname="col5">CLM-DGVM</oasis:entry>
         <oasis:entry colname="col6">TRIFFID</oasis:entry>
         <oasis:entry colname="col7">VECODE</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Tropical<?xmltex \hack{\hfill\break}?>trees</oasis:entry>
         <oasis:entry rowsep="1" colname="col2">tropical<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">tropical<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">tropical<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">tropical<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry colname="col6">broadleaf trees and<?xmltex \hack{\hfill\break}?>needleleaf trees</oasis:entry>
         <oasis:entry colname="col7">trees</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1"/>
         <oasis:entry rowsep="1" colname="col2">tropical<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>raingreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">tropical<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>raingreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">tropical<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>raingreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">tropical<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>raingreen</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Extratropical<?xmltex \hack{\hfill\break}?>trees</oasis:entry>
         <oasis:entry colname="col2">extratropical<?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">temperate<?xmltex \hack{\hfill\break}?>needleleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">temperate<?xmltex \hack{\hfill\break}?>needleleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">temperate<?xmltex \hack{\hfill\break}?>needleleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry rowsep="1" colname="col3">temperate<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">temperate<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">temperate<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" colname="col2"/>
         <oasis:entry rowsep="1" colname="col3">boreal<?xmltex \hack{\hfill\break}?>needleleaf<?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">boreal<?xmltex \hack{\hfill\break}?>needleleaf<?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">boreal<?xmltex \hack{\hfill\break}?>needleleaf<?xmltex \hack{\hfill\break}?>evergreen</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">extratropical<?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">temperate<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">temperate<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">temperate<?xmltex \hack{\hfill\break}?>broadleaf<?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry rowsep="1" colname="col3">boreal  <?xmltex \hack{\hfill\break}?>needleleaf <?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry rowsep="1" colname="col4">boreal <?xmltex \hack{\hfill\break}?>needleleaf <?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry colname="col5">boreal<?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">boreal<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry colname="col4">boreal<?xmltex \hack{\hfill\break}?>broadleaf <?xmltex \hack{\hfill\break}?>deciduous</oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Shrubs</oasis:entry>
         <oasis:entry rowsep="1" colname="col2">raingreen<?xmltex \hack{\hfill\break}?>shrubs</oasis:entry>
         <oasis:entry rowsep="1" colname="col3"/>
         <oasis:entry rowsep="1" colname="col4"/>
         <oasis:entry rowsep="1" colname="col5"/>
         <oasis:entry colname="col6">shrubs</oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">cold<?xmltex \hack{\hfill\break}?>deciduous<?xmltex \hack{\hfill\break}?>shrubs</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Grass</oasis:entry>
         <oasis:entry colname="col2">C3 grass</oasis:entry>
         <oasis:entry colname="col3">C3 grass</oasis:entry>
         <oasis:entry colname="col4">C3 grass</oasis:entry>
         <oasis:entry rowsep="1" colname="col5">Arctic grass</oasis:entry>
         <oasis:entry colname="col6">C3 grass</oasis:entry>
         <oasis:entry colname="col7">herbaceous</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" colname="col2"/>
         <oasis:entry rowsep="1" colname="col3"/>
         <oasis:entry rowsep="1" colname="col4"/>
         <oasis:entry rowsep="1" colname="col5">C3 grass</oasis:entry>
         <oasis:entry rowsep="1" colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">C4 grass</oasis:entry>
         <oasis:entry colname="col3">C4 grass</oasis:entry>
         <oasis:entry colname="col4">C4 grass</oasis:entry>
         <oasis:entry colname="col5">C4 grass</oasis:entry>
         <oasis:entry colname="col6">C4 grass</oasis:entry>
         <oasis:entry colname="col7"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e584">Pollen records are originally displayed in the form of pollen percentages or
pollen accumulation rates, what cannot be directly compared to plant
functional type distributions, as pollen records do not reflect the actual
plant abundances. For a systematic comparison of simulated plant functional
type distributions and reconstructions, both need to be converted in a
compatible format. In the last two decades, taxa to PFT assignment methods
and the method of “biomisation” for pollen-based reconstructions have been
developed (e.g. Prentice et al., 1996; Ni et al., 2010; Harrison et al.,
2010), so that pollen assemblages can be grouped into biomes (e.g. tropical
forest, temperate steppe, desert). Pollen-based biome syntheses have been
provided (Prentice et al., 1998, 2000; Bigelow et al., 2003; Ni et al.,
2010; Harrison, 2017; Tian et al., 2017) that have extensively been used to
evaluate simulated biome distributions obtained from diagnostic biome models
such as BIOME1 or BIOME4 (e.g. Prentice et al., 1992; Haxeltine and
Prentice, 1996; Kaplan et al., 2003). These biome models can be forced by
observed or simulated climate fields and calculate biome distributions in
equilibrium to this input climate. Using this classical method of
biomisation, fundamental palaeo-vegetation analysis can be undertaken (e.g.
Jolly et al., 1998; Harrison et al., 2003, 2016; Wohlfahrt et al., 2008;  Dallmeyer et al., 2017) without requiring an explicit
calculated vegetation distribution by the Earth system models (ESMs). On the
other hand, this also means that existing simulated plant functional type
distributions calculated by the DGVMs being dynamically coupled in these
models are neglected, since only the simulated climate pattern is taken into
account. The biomisation via diagnostic biome models did not include any
information on the original PFT distribution simulated by the Earth system models. As the DGVMs are generally more complex than the biome models and
include more relevant processes, valuable information included in the
PFT distribution gets lost in the classical biomisation by the biome
models. A more appropriate method of biomisation would be to  directly use the
PFT distributions calculated by the DGVMs.</p>
      <p id="d1e587">Several model studies have taken up this problem by introducing methods for
biomising PFT distributions simulated by DGVMs. Schurgers et al. (2006)
derive biome maps for the Eemian and mid-Holocene from the relative
fractional coverage of the individual PFTs and the soil temperature, both
simulated by LPJ. With this method, reconstructed major biome shifts could be
reproduced. Roche et al. (2007) used the dominant PFT and the bioclimate
limits defined in the biome model BIOME1 (Prentice et al., 1992) to biomise
PFT cover fractions for the Last Glacial Maximum (LGM) simulated by VECODE.
As VECODE distinguishes as main PFTs only trees and herbaceous plants, not
all biome types defined in BIOME1 could be considered (e.g. no shrubs). The
computed biome map shows reasonable agreement with LGM land cover
reconstructions. A similar approach was chosen by Handiani et al. (2012,
2013) for calculating biome distributions during Heinrich event 1, based on
PFT simulations of TRIFFID and CLM-DGVM. As these models strongly deviate in
their PFT classification, they applied different methods for biomisation. For
TRIFFID, they first calculated the dominant PFT in each grid cell following
the method by Crucifix et al. (2005) and afterwards used temperature
limitation defined in BIOME4 (Kaplan et al., 2003) to assign the dominant
PFTs to mega-biomes. For CLM-DGVM, potential dominant PFTs were estimated by
adopting the scheme of Schurgers et al. (2006) and biomes were differentiated
with the help of temperature limitations that follow the environmental
constraints defined in CCSM3 (i.e. the fully coupled model used in their
study, including the land and vegetation model CLM-DGVM).</p>
      <p id="d1e590">Recently, Prentice et al. (2011) introduced another approach of biomising
plant functional type distributions simulated by dynamic vegetation models.
In their method, simulated foliage projective cover (FPC) is used to
distinguish between desert, grassland/dry shrubland and forest biomes, which
are further divided into forest and savanna-like biomes through the
vegetation height. The assignment to, e.g. boreal, temperate or tropical
forest/savanna (or parkland) is controlled by the tree-PFT composition.
Climate limits are only used to distinguish the tundra biome. This method has
successfully been used in several palaeo-vegetation studies (Kageyama et al.,
2013; Calvo and Prentice, 2015) using different versions of the LPJ and
ORCHIDEE models.</p>
      <p id="d1e593">All of these methods have in common that they have been designed for
individual models and hence need specific output not necessarily provided by
all models. Therefore, these methods cannot directly be adopted for all
existing dynamic vegetation models. A consistent intermodel comparison of
the simulated vegetation distribution and an evaluation of the models
against reconstructions on biome level is so far not possible.</p>
      <p id="d1e596">To harmonise (palaeo)-vegetation distributions simulated by dynamic
vegetation models and thereby facilitate the evaluation of Earth system models (ESMs) and the comparison of model results and biome reconstructions,
we developed a biomisation technique that is based on the PFT distributions
simulated by DGVMs, few input variables and simple differentiation rules.
These include bioclimatic constraints using near-surface air temperature and
assumptions on maximum required PFT coverage. The aim of developing this
method<?pagebreak page337?> was not to construct a better biomisation method than the classical
method via diagnostic biome models but to develop a more direct method that
can convert PFT distributions into biomes so that the additional information
included due to the coupling of the DGVM will not get lost.</p>
      <p id="d1e599">We test this method on pre-industrial, mid-Holocene and Last Glacial Maximum
vegetation simulations performed in nearly all state-of-the-art dynamic
vegetation models. The skill of this biomisation approach is quantified via
(standard) metrics, by comparing the converted biome maps with estimates of
modern potential biome distributions (Ramankutty and Foley, 1999) and
pollen-based biome reconstructions (Biome6000 database, Harrison, 2017).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e605">Scheme of the biomisation method. The PFT fractions simulated by the
individual DGVMs are assigned to the PFT groups “desert” (i.e.
1 minus total vegetation), “grass”
(containing all grass PFT types) “woody PFT” (containing all trees and
shrub types) and “trees” (containing all tree types). The “trees” and
“woody PFTs” are further differentiated into “tropical trees”,
“temperate trees”, “temperate woody PFTs” and “boreal woody PFTs” via
bioclimatic limitations (Table 2). For DGVMs explicitly distinguishing
tropical, temperate or boreal tree types, the original classification of the
DGVM is used. Afterwards, the PFT groups are assigned to nine mega-biomes by
assumptions on the minimum coverage of certain PFT groups needed in a grid
cell and additional bioclimatic limitations (Table 2).</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f01.png"/>

      </fig>

</sec>
<sec id="Ch1.S2">
  <title>Methods</title>
<sec id="Ch1.S2.SS1">
  <title>Biomisation</title>
      <p id="d1e625">The PFT cover fractions simulated by the individual
dynamic vegetation models are converted into nine different mega-biomes
(Fig. 1), using few bioclimatic limits and assumptions on the maximum
required coverage of certain PFTs. The aggregation into the mega-biomes is in
line with the definitions of the BIOME6000 project (cf. Harrison, 2017) that
are also commonly used for grouping pollen-based biome reconstructions.
Bioclimatic limits and the differentiation rules basically follow the biome
assignment of the BIOME4 model (Kaplan et al., 2003). As input data, only
climatological<?pagebreak page338?> mean growing degree days (GDD0 and GDD5), monthly mean
2 m air temperature and multi-year mean PFT cover fractions (e.g. averaged
over 100 years) are required. The limitation to few climatic rules and few
variables needed enables the application of the method to all state-of-the-art
dynamic vegetation models.</p>
      <p id="d1e628">In detail, the PFTs calculated by the respective dynamic vegetation models
are aggregated into the groups “trees”, “woody PFTs” (i.e. shrubs and all
tree PFTs), “grass” and “desert”, which is calculated as 1 minus the
total vegetation. If the model includes land-use types, the affected areas
are redistributed to the other PFTs by simply scaling up the other PFT
fractions proportionally to their ratio of the total natural vegetation.
Based on these groups, regions dominated by trees and regions in which the
cover fraction of the woody PFTs exceeds 25 % (with the additional
constraint of the total vegetation cover exceeding 50 %) are identified,
as these are necessary conditions for the assignment of the land cover to
forest biomes. Afterwards, the groups “trees” and “woody PFTs” are split
into boreal (GDD5 <inline-formula><mml:math id="M1" display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 900 <inline-formula><mml:math id="M2" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), temperate
(GDD5 &gt; 900 <inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) and tropical trees or woody PFTs
(Tc &gt; 15.5 <inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) via temperature limits (cf. Table 2). If
any of these tree PFTs are simulated directly in the vegetation model (e.g.
in LPJ or ORCHIDEE), the original distributions are taken and the PFT group
is assigned to the dominant tree type, i.e. the tree type that covers the
largest fraction of the grid cell. These PFT groups (i.e. boreal woody PFTs,
temperate trees and woody PFTs, tropical trees, grass and desert) are the
first consistent vegetation classification shared by all input simulations,
so that model-to-model comparison is also possible on this PFT level.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e668">Bioclimatic limits and assumptions on minimum PFT coverage needed
for the assignment of PFTs into the PFT groups and into the nine mega-biomes.
The separation of boreal, temperate and tropical tree PFTs is based on the
same bioclimatic limits as the respective forest mega-biomes. Only
temperature-based limitations are used, i.e. the growing degree days on a
basis of 5 <inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (GDD5) or on a basis of 0 <inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (GDD0), the
monthly mean temperature of the coldest month (Tc) and the annual mean
temperature (<inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">ann</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). Bioclimatic limits are mainly taken from the
BIOME4 model (Kaplan et al., 2003, marked with <inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>). The limit for tropical
forest is taken from BIOME1 (Prentice et al., 1992) but is also commonly used
in DGVMs (e.g. JSBACH). The limit for the differentiation of deserts has been empirically
determined in this study and is close to the value chosen by Handiani et
al. (2013) and within the range of the Köppen–Geiger climate
classification for polar climate and the Holdridge alpine life zone
classification. The Tc limit for warm savannas is taken from JSBACH (C4 grass
criteria) to exclude temperate savannas. The assumptions on minimum coverage
have been partly taken, partly empirically adapted from Handiani et
al. (2013). A flow chart displaying the biomisation procedure is shown in
Appendix A for the VECODE model, the DGVM used in the CLIMate-BiosphERe 2
(CLIMBER-2) model.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Mega-biome</oasis:entry>
         <oasis:entry colname="col2">Minimum coverage needed</oasis:entry>
         <oasis:entry colname="col3">Bioclimatic limitations</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Tropical forest</oasis:entry>
         <oasis:entry colname="col2">Tropical trees dominant</oasis:entry>
         <oasis:entry colname="col3">Tc &gt; 15.5 <inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Warm–temperate forest</oasis:entry>
         <oasis:entry colname="col2">Temperate trees dominant</oasis:entry>
         <oasis:entry colname="col3">GDD5 &gt; 3000 <inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C<inline-formula><mml:math id="M11" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Temperate forest</oasis:entry>
         <oasis:entry colname="col2">Temperate woody PFTs dominant</oasis:entry>
         <oasis:entry colname="col3">900 <inline-formula><mml:math id="M12" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C &lt; GDD5 <inline-formula><mml:math id="M13" display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 3000 <inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Boreal forest</oasis:entry>
         <oasis:entry colname="col2">Boreal woody PFTs dominant</oasis:entry>
         <oasis:entry colname="col3">GDD5 <inline-formula><mml:math id="M16" display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 900 <inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C<inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(Warm) savanna and dry woodland</oasis:entry>
         <oasis:entry colname="col2">Woody PFT coverage &gt; 0.25</oasis:entry>
         <oasis:entry colname="col3">GDD5 &gt; 1200 <inline-formula><mml:math id="M19" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>, Tc &gt; 10 <inline-formula><mml:math id="M21" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Grassland and dry shrubland</oasis:entry>
         <oasis:entry colname="col2">Total vegetation cover &gt; 0.2</oasis:entry>
         <oasis:entry colname="col3">GDD0 <inline-formula><mml:math id="M22" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 800 <inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C<inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Tundra</oasis:entry>
         <oasis:entry colname="col2">Total vegetation cover &gt; 0.1</oasis:entry>
         <oasis:entry colname="col3">GDD0 &lt; 800 <inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C<inline-formula><mml:math id="M26" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(Warm) desert</oasis:entry>
         <oasis:entry colname="col2">Total vegetation cover &lt; 0.2</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">ann</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> &gt; 2 <inline-formula><mml:math id="M28" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Polar desert/ice</oasis:entry>
         <oasis:entry colname="col2">Total vegetation cover &lt; 0.2</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">ann</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> &lt; 2 <inline-formula><mml:math id="M30" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e1036">For the biomisation, the forests are considered first; i.e. regions in which
trees or woody PFTs are dominant or cover an area more than 25 % are
assigned to tropical, temperate and boreal forests according to the
PFT groups. From the temperate forest, warm regions (i.e.
GDD5 &gt; 3000 <inline-formula><mml:math id="M31" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) revealing a dominant temperate tree
fraction are subtracted and assigned to the biome “warm–temperate forest”.
The remaining area is then tested for fulfilling the constraints for the
non-forest biomes. First, the savanna and dry woodland region is identified
by bioclimatic limitations (GDD5 &gt; 1200 and
Tc &gt; 10 <inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) and a woody PFT coverage of at least
25 %. The remaining vegetated area is assigned to the biome “grassland
and dry shrublands”, if GDD0 exceeds 800 <inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, or to the biome
“tundra”, if GDD0 is below 800 <inline-formula><mml:math id="M34" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (cf. BIOME4; Kaplan et al.,
2003). The non-vegetated area, i.e. regions in which the total vegetation
cover is less than 20 %, is either assigned to warm or to cold desert,
depending on whether the annual mean temperature is above or below
2 <inline-formula><mml:math id="M35" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. For the biome “tundra”, only 10 % vegetation cover is
needed. A flow chart summarising the details of the PFT-based biomisation is
shown for the VECODE model in Appendix A.</p>
      <p id="d1e1085">We are aware of the simplicity of this approach, calculating the tundra and
the grassland and dry shrubland biomes as a residual of the non-forested area,
not directly depending on the simulated grass PFT fraction. We decided to
attribute the main priority to the forested biomes as this is also the strategy
commonly used in DGVMs and biome models.</p>
      <p id="d1e1088">To assess the performance of the biomisation based on simulated PFTs, we
additionally biomise the simulated climate fields corresponding to the
PFT distributions in each model. This is the conventionally used procedure
to biomise general circulation model (GCM) or ESM output (further<?pagebreak page339?> referred to as the classical approach or
climate-based method). For this purpose, we use the biome model BIOME1
(Prentice et al., 1992) that calculates the biome distribution in
equilibrium to the input climate. As forcing, BIOME1 needs the monthly mean
climatological precipitation, near-surface temperature and cloudiness, which
were taken from each simulation considered in this study, respectively. This
classical biomisation approach can only handle climate data as input; the
simulated PFT distributions from the ESMs used in the here-introduced
PFT-based method are ignored. The original biomes have been grouped into the
same mega-biome classification that is used for the PFT-based approach.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Simulations</title>
      <p id="d1e1097">Simulations from nearly all state-of-the-art global dynamic vegetation models
that are included in Earth system models have been selected for biomisation.
Six different models could be considered (i.e. JSBACH, TRIFFID, ORCHIDEE,
SEIB, LPJ and VECODE). Overall, eight simulations for the pre-industrial
climate (PI) and vegetation, four for mid-Holocene (6 ka) conditions and five for Last Glacial Maximum (LGM) conditions
have been used (Table 3). Most of these simulations were performed within
CMIP5/PMIP3 under strict simulation and output protocols enabling direct
comparison between the models (Braconnot et al., 2011; Taylor et al., 2012).
These include the models MPI-ESM-P, IPSL-CM5A-LR, MIROC-ESM and HadGem2-ESM.
Further details on the models and simulations are described in Appendix B.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p id="d1e1103">Overview of the simulations used for testing the biomisation method.
Listed are the model acronym, the model name, the name of the included DGVM,
the simulations used in this study, the spatial resolution used in the
simulations, the number of PFTs (natural plus anthropogenic) and the
simulation reference. Simulations marked with the <inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> symbol include land
use. Simulations marked with the # symbol ran with prescribed vegetation.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.96}[.96]?><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="85.358268pt"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="190.633465pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Model acronym</oasis:entry>
         <oasis:entry colname="col2">Model (DGVM)</oasis:entry>
         <oasis:entry colname="col3">Period</oasis:entry>
         <oasis:entry colname="col4">Resolution</oasis:entry>
         <oasis:entry colname="col5">PFT</oasis:entry>
         <oasis:entry colname="col6">Reference</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">MPI-ESM-T63</oasis:entry>
         <oasis:entry colname="col2">MPI-ESM-P<?xmltex \hack{\hfill\break}?>(JSBACH)</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">PI<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>#</oasis:entry>
         <oasis:entry colname="col4">T63</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry rowsep="1" colname="col6">cmip5.output1.MPI-M.MPI-ESM-P.piControl.mon.<?xmltex \hack{\hfill\break}?>land.Lmon.r1i1p1.v20120315</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry rowsep="1" colname="col3">6 ka</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry rowsep="1" colname="col6">cmip5.output1.MPI-M.MPI-ESM-P.midHolocene.<?xmltex \hack{\hfill\break}?>mon.land.Lmon.r1i1p2.v20120713</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">LGM</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">cmip5.output1.MPI-M.MPI-ESM-P.lgm.mon.land.<?xmltex \hack{\hfill\break}?>Lmon.r1i1p2.v20120713</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MPI-ESM-T31</oasis:entry>
         <oasis:entry colname="col2">MPI-ESM-P<?xmltex \hack{\hfill\break}?>(JSBACH)</oasis:entry>
         <oasis:entry colname="col3">PI, LGM</oasis:entry>
         <oasis:entry colname="col4">T31</oasis:entry>
         <oasis:entry colname="col5">8</oasis:entry>
         <oasis:entry colname="col6">Klockmann et al. (2016)<?xmltex \hack{\hfill\break}?>(piCTL, LGMref)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IPSL-ESM-T31</oasis:entry>
         <oasis:entry colname="col2">IPSL-CM5A-LR<?xmltex \hack{\hfill\break}?>(ORCHIDEE)</oasis:entry>
         <oasis:entry colname="col3">PI<inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>#</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.875</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">3.75</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">pmip3.output.IPSL.IPSL-CM5ALR.piControl.<?xmltex \hack{\hfill\break}?>monClim.land.Lclim.r1i1p1.v20140428</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IPSL-ESM-T63</oasis:entry>
         <oasis:entry colname="col2">CRUNCEP or <?xmltex \hack{\hfill\break}?>IPSL-CM5A-LR <?xmltex \hack{\hfill\break}?>(ORCHIDEE-MICT)</oasis:entry>
         <oasis:entry colname="col3">PI, LGM</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">10</oasis:entry>
         <oasis:entry colname="col6">Zhu (2016),<?xmltex \hack{\hfill\break}?>Zhu et al. (2018)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HadGEM2-ESM</oasis:entry>
         <oasis:entry colname="col2">HadGEM2-ES <?xmltex \hack{\hfill\break}?>(TRIFFID)</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">PI<inline-formula><mml:math id="M43" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.875</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:mn mathvariant="normal">6</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry rowsep="1" colname="col6">cmip5.output1.MOHC.HadGEM2-ES.piControl.<?xmltex \hack{\hfill\break}?>mon.land.Lmon.r1i1p1.v20111007</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">6 ka</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">cmip5.output1.MOHC.HadGEM2-ES.midHolocene.<?xmltex \hack{\hfill\break}?>mon.land.Lmon.r1i1p1.v20120222</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CLIM-LPJ</oasis:entry>
         <oasis:entry colname="col2">CRU/CLIMBER-2 <?xmltex \hack{\hfill\break}?>(LPJ)</oasis:entry>
         <oasis:entry colname="col3">PI, 6 ka</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">9</oasis:entry>
         <oasis:entry colname="col6">Similar to Kleinen et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MIROC-ESM</oasis:entry>
         <oasis:entry colname="col2">MIROC-ESM <?xmltex \hack{\hfill\break}?>(SEIB)</oasis:entry>
         <oasis:entry rowsep="1" colname="col3">PI<inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">T42</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry rowsep="1" colname="col6">cmip5.output1.MIROC.MIROC-ESM.piControl.<?xmltex \hack{\hfill\break}?>mon.land.Lmon.r1i1p1.v20120710 <?xmltex \hack{\hfill\break}?>Watanabe et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry rowsep="1" colname="col3">6 ka</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry rowsep="1" colname="col6">cmip5.output1.MIROC.MIROC-ESM.midHolocene.<?xmltex \hack{\hfill\break}?>mon.land.Lmon.r1i1p1.v20120710</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">LGM</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">cmip5.output1.MIROC.MIROC-ESM.lgm.mon.<?xmltex \hack{\hfill\break}?>land.Lmon.r1i1p1.v20120710</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CLIMBER</oasis:entry>
         <oasis:entry colname="col2">CLIMBER-2 <?xmltex \hack{\hfill\break}?>(VECODE)</oasis:entry>
         <oasis:entry colname="col3">PI, LGM</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2</oasis:entry>
         <oasis:entry colname="col6">Thomas Kleinen (personal communication, 2017)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p id="d1e1635">For the pre-industrial time slice, two out of eight simulations (MPI-ESM-T63
and IPSL-ESM-T31) were performed with fixed vegetation distribution, but
this has essentially no effect on the biomisation procedure. Therefore, we
include these simulations in our analysis. Nevertheless, the PFT-based
biome distributions for these simulations are expected to fit better to the
references than the other simulations that ran with interactive vegetation.</p>
      <p id="d1e1638">We emphasise that this study is thought of as an introduction and detailed
evaluation of a new biomisation method. It is not seen as evaluation of the
different vegetation models with respect to the skill of simulating biome or
vegetation distributions. For this purpose, the different vegetation models
would have to be forced by the same climate state. Such an ensemble including
all DGVMs (used here) does not exist. Therefore, we had to take individual
simulations that all deviate with respect to the prescribed or simulated
climate in the coupled models. These differences in the climatic field among
the models and between the models and observations (general climate biases)
lead – per se – to differences in the simulated vegetation distributions
and biases to the reference vegetation distribution.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Preparing the reference datasets</title>
      <p id="d1e1647">As reference, we use the estimated global potential natural vegetation map by
Ramankutty and Foley (1999, referred to as RF99 in the following), which is a
combination of modern satellite-based vegetation observations (i.e. the
DISCover land cover dataset) and the vegetation compilation prepared by
Haxeltine and Prentice (1996) that has been taken for regions dominated by
land use at present day. The RF99 dataset is available at 5 min resolution
and distinguishes 15 different biome types that are similar to the mega-biome
classification<?pagebreak page340?> used here. Thus, most biomes could directly be assigned to the
mega-biome types (Table C1 in Appendix C). The preparation of the RF99
reference dataset is explained in more detail in Appendix C.</p>
      <p id="d1e1650">As further reference data, we use pollen-based biome reconstructions that are
available for the modern, mid-Holocene and Last Glacial Maximum time slices
within the Biome6000 database (Harrison, 2017). The biome reconstructions
have been grouped into the mega-biomes according to the suggestions made by
the Biome6000 project.</p>
      <p id="d1e1653">Both vegetation datasets are derived for the modern time slice not exactly
corresponding to the pre-industrial period (around 1850 AD) simulated in the
models. While the ice sheet, the topography and the orbital conditions used
for the pre-industrial control simulations are prescribed from modern
conditions, greenhouse gases are set to pre-industrial values in the models.
These differences in, e.g. atmospheric <inline-formula><mml:math id="M50" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration between the reference
datasets and the simulations may lead to small discrepancies in the model. In
addition, the references may be disturbed by anthropogenic influences.</p>
      <p id="d1e1667">Climatological monthly mean data of the years 1901–1930 from the University of East Anglia Climate Research Unit Time
Series 4.00 (CRU TS4, University of East Anglia, 2017) have been taken as the pre-industrial reference climate. This
is the earliest period available. The CRU TS4 reference climate has
additionally been used as forcing for the BIOME1 model to provide a best
guess for the pre-industrial biome map. We assume that neither the
biomisation of simulated climate states (i.e. the classical method) nor the
biomisation of simulated PFTs can agree better with any reference than this
biome distribution, derived with a highly tuned<?pagebreak page341?> biome model and the best
global climate observation available. Therefore, we use the level of
agreement between the CRU TS4 biome map and the RF99 or the Biome6000
reconstructions as target value for our new biomisation method. The reference
biome distributions and the CRU TS4-based biome map are displayed in Fig. 2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p id="d1e1673">Reference biome distributions for the pre-industrial time slice,
i.e. <bold>(a)</bold> the biome distribution inferred by BIOME1 that has been
forced by the CRU TS4 dataset (1901–1930), interpolated to a Gaussian T63
grid; <bold>(b)</bold> the pollen-based pre-industrial biome reconstructions
provided by the Biome6000 database (Harrison, 2017); <bold>(c, d)</bold> the
modern potential natural vegetation map derived by Ramankutty and
Foley (1999, RF99) remapped on a T63 gaussian grid <bold>(c)</bold> and a
10<inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid <bold>(d)</bold>. The biomes are tropical forest (trop.forest),
warm–temperate forest (warm.forest), temperate forest (temp.forest), boreal
forest (bor.forest), savanna and dry woodland (savanna), grassland and dry
shrubland (grassland), warm desert (desert), tundra (tundra) and polar desert
and ice (ice/pol.desert).</p></caption>
          <?xmltex \igopts{width=412.564961pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f02.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS4">
  <title>Metrics</title>
<sec id="Ch1.S2.SS4.SSS1">
  <title>Kappa statistic</title>
      <p id="d1e1718">The kappa statistic (Cohen, 1960) is a widely used quantitative
map-comparison technique that has often been applied for assessing the
performance of vegetation simulations (e.g. Monserud and Leemans, 1992;
Prentice et al., 1992; Diffenbaugh et al., 2003; Tang et al., 2009). The
kappa statistic not only includes the actual observed similarity (<inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) of
two categorical maps but also considers the expected agreement
(<inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), i.e. the agreement by chance. For each pair of compared
grid cells (or a pair of grid cell and site) taken from the reference and the
simulated biome distributions, a confusion matrix is prepared containing all
combinations of referenced and simulated biomes. Based on this error matrix,
the agreement for each individual mega-biome is given by the following
(Eq. 1, taken from Tang et al., 2009):
              <disp-formula id="Ch1.E1" content-type="numbered"><mml:math id="M54" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">r</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi mathvariant="normal">c</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">r</mml:mi></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi mathvariant="normal">c</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfenced><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">r</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi mathvariant="normal">c</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the individual entry for biome <inline-formula><mml:math id="M56" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> on the main diagonal of
the confusion matrix and <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">r</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi mathvariant="normal">c</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are the row total and the
column total of each biome <inline-formula><mml:math id="M59" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>, respectively. The overall agreement is
derived by Eq. (2):
              <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M60" display="block"><mml:mrow><mml:mi mathvariant="italic">κ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi>p</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            with <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">r</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi>p</mml:mi><mml:mrow><mml:mi mathvariant="normal">c</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M63" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> ranges from 0
(not better than agreement by chance) to 1 (perfect agreement). We
additionally use the thresholds suggested by Landis and Koch (1977),
classifying a <inline-formula><mml:math id="M64" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> below 0.4 into poor agreement, values between 0.4 and
0.75 in fair to good agreement and values exceeding 0.75 into very good to
excellent agreement.</p>
</sec>
<sec id="Ch1.S2.SS4.SSS2">
  <title>Fractional skill score (FSS)</title>
      <p id="d1e2041">The standard kappa statistic underestimates the similarity of maps sharing a
similar biome distribution but being slightly offset from each other (Foody,
2002; Tang et al., 2009). This problem is usually overcome by using the fuzzy
kappa statistic allowing for fuzziness in category and fuzziness in location
(Hagen, 2003, 2009), but the fuzzy kappa statistic is only applicable to
assess the similarity of categorical maps and cannot be used for single
point to gridded-data comparison. Biome reconstructions only exist for single
sites and usually indicate not only the local or the regional vegetation
but may contain a large extra-regional component, depending, e.g. on the
configuration (mainly the size) of the lake (Jacobsen and Bradshaw, 1981). A
single grid-cell-to-point comparison is thus only partly meaningful; more
advisable is the inclusion of the surrounding grid cells of the sites.
Therefore, we looked for a metric taking agreement in the neighbourhood into
account (such as the fuzzy kappa statistic) that could easily be adapted to
site to gridded-data comparison. We decided to use the fractional skill score
(FSS; Roberts and Lean, 2008). While this method was initially developed and
applied for expressing the performance of precipitation forecasts (e.g.
Gilleland et al., 2009; Mittermaier et al., 2013; Wolff et al., 2014), it has
recently been successfully used for different hydrological patterns (Koch et
al., 2017). We further adapted the FSS method to biome distributions. For
each mega-biome type, the reference (ref) and simulation (sim) are truncated
into a binary map; i.e. we construct 18 maps (9 for the reference, 9 for the
simulation), in which the grid cell being covered by the respective
mega-biomes is filled with the value “1” and all other grid cells are
assigned to the value “0”. Based on these maps, the mean fractional
coverage of the respective mega-biome within the neighbourhood <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>
(three grid cells in each direction for T31, six for T63, one for a 10<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid)
of each cell is calculated for the reference and the simulation. Afterwards,
the mean square error (MSE) between the simulation and the reference
fractions for each individual mega-biome is calculated and normalised by the
MSE representing the worst-case agreement (MSEw), i.e. the MSE reflecting no
similarity between the reference and the simulation. The fractional skill
score is then given by Eq. (3):
              <disp-formula id="Ch1.E3" content-type="numbered"><mml:math id="M67" display="block"><mml:mrow><mml:mi mathvariant="normal">FSS</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="normal">MSE</mml:mi><mml:mi mathvariant="normal">MSEw</mml:mi></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where MSE <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:mfenced open="[" close="]"><mml:mrow><mml:msub><mml:mi mathvariant="normal">ref</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">sim</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> and MSEw <inline-formula><mml:math id="M69" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:mfenced open="[" close="]"><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:msubsup><mml:mi mathvariant="normal">ref</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:msubsup><mml:mi mathvariant="normal">sim</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M71" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the number of all neighbourhoods.</p>
      <p id="d1e2270">Following Robert and Lean (2008), we define the lowest skill by the
FSS<inline-formula><mml:math id="M72" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">ran</mml:mi></mml:msub></mml:math></inline-formula> of a random biome distribution with the same fractional
coverage as the observed one over the domain (<inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>). Likewise, the target
skill is given by the FSS that is reached for a uniform distribution of the
observed biome fraction everywhere in the domain (FSS<inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi mathvariant="normal">uni</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>+</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>). As FSS<inline-formula><mml:math id="M75" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">ran</mml:mi></mml:msub></mml:math></inline-formula> and FSS<inline-formula><mml:math id="M76" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">uni</mml:mi></mml:msub></mml:math></inline-formula> deviate between the
individual biomes, we compare the relative FSS (rFSS) given by
FSS-FSS<inline-formula><mml:math id="M77" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">uni</mml:mi></mml:msub></mml:math></inline-formula>.</p>
      <p id="d1e2346">The total rFSS is calculated as mean of all individual mega-biome scores. The
total and individual rFSS can range from approximately <inline-formula><mml:math id="M78" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.5 (as good as a random distribution) to approximately 0.5 (perfect
agreement), depending on the extent of the individual biomes. The skill to
reach is zero for all biomes. For simplicity, we also use just FSS as an
abbreviation for the relative FSS.</p>
</sec>
<?pagebreak page342?><sec id="Ch1.S2.SS4.SSS3">
  <title>Best neighbour score</title>
      <p id="d1e2362">Neither the FSS nor the fuzzy kappa statistic is in its original format
applicable for the comparison of site data vs. gridded data. For quantifying
the similarity of simulated biome distributions and pollen-based biome
reconstructions, we therefore implement a new metric following both methods
called the best neighbour score (BNS), accounting for agreement in the
neighbourhood of the record site and therewith being more tolerant of the
position of the site. Within this metric, not only the grid box locating the
record sites is used for comparison with the records but also the
surrounding grid boxes (three grid boxes in each direction for T31, six for T63,
one for a 10<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid). Similar to the fuzzy kappa statistic, the similarity
in the neighbouring grid cells is expressed by a distance decay function. We
here choose a Gaussian function (Eq. 4), giving grid cells directly at the
site proportional larger influence than grid boxes far away.
              <disp-formula id="Ch1.E4" content-type="numbered"><mml:math id="M80" display="block"><mml:mrow><mml:mi>w</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">e</mml:mi></mml:mrow><mml:mrow><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mtext>distance</mml:mtext><mml:mn mathvariant="normal">3</mml:mn></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">with</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">distance</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">long</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi mathvariant="normal">d</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">lat</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt></mml:mrow></mml:math></disp-formula>
            The best neighbour is defined as the nearest grid box within the
neighbourhood agreeing with the reconstructed biome type. The agreement for
each record is then given by the distance weight (<inline-formula><mml:math id="M81" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula>) of the best neighbour
in each neighbourhood. It is equal to 1 if the grid box locating the site
indicates the same biome as reconstructed and it is equal to 0 if all
grid cells in the neighbourhood disagree with the record. The BNS is the mean
of all individual neighbourhood scores. For instance, a BNS of approximately 0.82
or 0.46 means that the best neighbour grid cell is among the grid cell
“circle” next to the site-locating grid cell in T63 or T31, respectively.
Accordingly, a BNS of 0.04 indicates a distance between the best neighbour
and the site-locating grid cell of 7.5<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> on a Gaussian grid. In
contrast to the fuzzy kappa statistic, the BNS neither takes agreement by
chance into account nor considers potential spatiotemporal autocorrelation.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p id="d1e2460">Simulated pre-industrial mega-biome distributions according to the
new biomisation method (PFT-based method). The PFT fractions simulated by the
individual models have been converted into mega-biomes through climate
limitation rules and assumptions on the maximum coverage of certain PFTs
needed in the grid cells.</p></caption>
            <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f03.png"/>

          </fig>

      <p id="d1e2469">At this point it should be noted that we have selected the metrics in
accordance with the research question of this study. For other purposes, such
as estimating changes in biome distribution between present and future
climate states, other metrics may be more appropriate, such as the Delta-V
method, which also weights changes in vegetation attributes (Sykes et al.,
1999). The metrics used in our study do not differentiate how far the biomes
deviate in their properties; e.g. differences between tropical forest and
tundra are equated as being qualitatively the same as differences between
temperate and boreal forest.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e2475">Simulated pre-industrial biome distributions according to the
classical biomisation approach, i.e. biomising the climate states simulated
by the individual models. The climate field were used to force the biome
model BIOME1 (Prentice et al., 1992). Afterwards, the original BIOME1 biomes
were aggregated into the nine mega-biomes used in this study.</p></caption>
            <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f04.png"/>

          </fig>

</sec>
</sec>
</sec>
<?pagebreak page343?><sec id="Ch1.S3">
  <title>Results</title>
<sec id="Ch1.S3.SS1">
  <title>Comparison of the PFT-based and climate-based biome distributions for
the pre-industrial time slice</title>
      <p id="d1e2497">For the pre-industrial time slice, the PFT coverage of eight different Earth
system model simulations has been converted into mega-biome distributions
(Fig. 3). Additionally, the underlying pre-industrial climate states are used
as forcing for the BIOME1 model (i.e. the classical way of biomisation) to
calculate the mega-biome distributions in equilibrium with the simulated
climate states (Fig. 4). Overall, the PFT-based biome maps look similar to
the climate-based ones. All major biome belts can be reproduced using the new
method, independent of the resolution or the complexity of the vegetation
models. The biomisation based on the PFT coverage generally assigns more grid
cells to forest or woody biomes (e.g. savanna instead of grassland or desert)
than the classical method. This is most noticeable in South America, where
the area covered by tropical forests is strongly increased in the PFT-based
biome distribution (Table D1), being more in line with observations.
Likewise, the savanna and/or forest biomes are more spread out on the African
continent for nearly all biomisations with the exception of the
CLIMate-BiosphERe 2 (CLIMBER-2) model and IPSL-ESM-T63.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p id="d1e2502">Metrics quantifying the total agreement of the simulated
pre-industrial biome maps based on the PFT cover fractions (PFT method) or
based on the climate state (classical approach using BIOME1) with the
reference datasets, i.e. modern potential natural vegetation (RF) and
pre-industrial pollen-based biome reconstructions (rec.). Shown are the kappa
values <bold>(a)</bold>, the relative fractional skill score (FSS, <bold>b</bold>)
and the best neighbour score (BNS, <bold>c</bold>) for all models and also for
the biomisation based on the CRU TS4 observational climate data in original
resolution (CRU TS4) and interpolated to a T63 grid (CRU TS4_T63).</p></caption>
          <?xmltex \igopts{width=483.69685pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f05.png"/>

        </fig>

      <p id="d1e2520">The Asian forest regions are slightly larger in most PFT-based
biome distributions compared to the climate-based ones. This impression is
reinforced by the fact that for CLIM-LPJ and IPSL-ESM-T63 the PFT method
suggests a<?pagebreak page344?> pronounced boreal forest belt in northern Asia, not only reducing
the size of the grassland but also that of the temperate forest area.</p>
      <p id="d1e2523">For North America, the PFT-based approach yields less forest for MPI-ESM-T63
and IPSL-ESM-T31 than shown by the climate-based biomisation. As a
consequence, the North American prairie fits better to observations for the
PFT-based biome distributions. In Alaska and north-western Canada, parts of
the tundra regions suggested by BIOME1 tend to be replaced by boreal forest
when using the new approach, which is generally more consistent with the
observed vegetation.</p>
      <p id="d1e2527">The differences between the PFT-based and climate-based biome distributions
can be caused by deficiencies in the biomisation methods, biases related to
the imperfect vegetation models or biases in the simulated climate. While
the effect of shortcomings in the vegetation models cannot be disentangled,
the caveats of the PFT-based method and the effect of climate biases on the
PFT-to-biome conversion are further discussed in Sect. 4.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Quantitative comparison of the PFT-based biome distributions with
reference biome maps</title>
      <p id="d1e2536">To quantify the skill of the new method to represent the global biome
distribution, we compare the resulting biome maps with the modern potential
natural vegetation cover estimated by Ramankutty and Foley (1999, RF99 in the
following) and the pre-industrial biome reconstructions provided<?pagebreak page345?> by the
Biome6000 project (Harrison, 2017). As target for the skill, the level of
agreement between the BIOME1 derived biome distribution of the observed
climate (CRU TS4, 1901–1930; cf. Fig. 2) and the reference datasets
is taken, i.e. <inline-formula><mml:math id="M83" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> of 0.68 and FSS of 0.13 (Fig. 5) with respect to
RF99 and a <inline-formula><mml:math id="M84" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> of 0.46 and BNS of 0.73 with respect to the biome
reconstructions.</p>
      <p id="d1e2553">The PFT-based biome distributions agree well with the references, independent
of the model. The kappa statistic shows an overall agreement to RF99 between
0.54 (for MIROC-ESM) and 0.79 (for MPI-ESM-T63) revealing a good to very
good agreement (Fig. 5). Likewise, all models reach in total the level of
good skill in the FSS metric (0.01–0.27). This agreement is in line with or
even better than the match between RF99 and the climate-based biomisation and
that between RF99 and the CRU TS4 biomisation that is taken as the target skill
(Fig. 5). However, the spread between the individual models is larger for the
PFT-based method than for the classical approach.</p>
      <p id="d1e2556">As expected, the kappa statistic indicates that the PFT-based biome maps
compare worse with the reconstructions than with RF99, underestimating the
similarity to the point reconstructions. <inline-formula><mml:math id="M85" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> ranges from 0.2 (poor) to
0.49 (fair), which is in line with the target skill and the metrics for the
climate-based biome maps. The BNS, additionally considering accordance in the
neighbouring grid cells of the record sites, reveals a good to very good
agreement of the PFT-based biome distributions and the records (between 0.40
and 0.74), not much lower than the target skill and in accordance with the
climate-based biomisations. For the MPI-ESM, IPSL-ESM-T31, HadGEM2-ESM and
CLIMBER biomisations, the PFT-based method even produces biome distributions
that fit better to the biome reconstructions than the climate-based biome
maps.</p>
      <p id="d1e2566">Despite the overall agreement between the PFT-based biome distributions and
the references, a closer look at the representation of individual mega-biomes
in the converted maps indicates large differences among the models as well as
among the individual mega-biomes (Fig. 6). While tropical forests and deserts
compare best with RF99, the biome “warm–temperate forest” is not reproduced,
independent of the underlying model simulation.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p id="d1e2572">Kappa metric quantifying the agreement of the simulated
pre-industrial individual mega-biomes with the reference dataset (i.e. modern
potential natural vegetation) for the PFT-based
method <bold>(a)</bold> and the classical method using BIOME1 forced with the
simulated background climate states <bold>(b)</bold>.</p></caption>
          <?xmltex \igopts{width=384.112205pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f06.png"/>

        </fig>

      <p id="d1e2587">The skill for simulating the other biomes is very different for the diverse
models. <inline-formula><mml:math id="M86" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> spreads from poor for one model to very good for other
models. Correcting the PFT distribution in land-use areas by redistributing
the area fraction to the other tiles has no impact on the performance of the
method. The biome maps based on simulations applying land use do not compare
worse with RF99 than the maps of other simulations. Likewise, the complexity
of the vegetation model and the number of distinguished PFTs have no
significant effect on the representation of the biome distribution,
indicating that the climate limits used in the biomisation procedure are
appropriate for the assignment of the PFTs to the distinct PFT groups. The
differentiation of the PFT types (e.g. the different forest types) in
vegetation models is often based on similar climate limits, regardless of
whether the model is a complex dynamic vegetation model or a simple biome
model. With the exception of the PFT-based biomisation for CLIMBER, in which
the coarse grid is clearly<?pagebreak page346?> disadvantageous for capturing the reconstructed
desert belts and the rather regionally confined biomes (savanna,
warm–temperate forest), the spatial resolution of the models is not the
primary factor for the spread in the metrics. The PFT-based method performs
equally well for simulations using T63 as for simulations using T31 (in
total); only the regionally distributed warm–temperate forest is better
represented in finer resolutions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p id="d1e2599">Simulated mid-Holocene biome distribution in the different models,
based on the PFT method <bold>(a)</bold>, pollen-based biome reconstructions of
the mid-Holocene biome distribution (BIOME6000 database, <bold>b</bold>) and the
best neighbour score (BNS) for all individual sites showing the agreement of
the reconstructed biomes and the biome distribution in the neighbourhood of
the sites, ranging from 0 (no grid cell in the surrounding area shows the
same biome as reconstructed) to 1 (the grid cell locating the site and the
record at the site indicate the same biome) (<bold>c</bold>).</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f07.png"/>

        </fig>

      <p id="d1e2617">In general, the skill in representing the individual mega-biomes is similar
for the PFT- and climate-based methods. Both approaches have the same
strengths and weaknesses, but the spread between the models is larger for the
PFT-based biomisations. In comparison to the climate-based method, the
tropical, the warm–temperate and the boreal forest biomes tend to be
slightly better represented by the PFT-based method. In contrast, the
temperate forest, savanna and grassland distribution – averaged over all
models – fit better to RF99 when using the climate-based approach, although
for individual simulations, <inline-formula><mml:math id="M87" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> derived for the PFT biomisation exceeds
the climate-based one. The savanna and grassland biomes are particularly
misrepresented in the biome maps that are based on the PFT distributions
simulated by MIROC-ESM, CLIMBER, CLIM-LPJ and HadGEM2-ESM. The temperate
forest is poorly reproduced only in the PFT-based biomisation of CLIM-LPJ.
Overall, the metrics indicate that the PFT-based method works as well as the
classical approach of biomising climate states via the BIOME1 model.
Likewise, the method is able to keep up with the method by Prentice et
al. (2011), further discussed in Appendix E.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p id="d1e2629">Differences in the desert fractional coverage simulated by the
individual models between the mid-Holocene (6 ka) and pre-industrial time
slices (0 ka).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f08.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <title>PFT-based biome distributions for the mid-Holocene and Last Glacial
Maximum time slice</title>
      <p id="d1e2644">The sensitivity of the PFT-based method to changes in the vegetation cover is
assessed by evaluating palaeo-biome distributions. For the mid-Holocene
time slice, four different simulations have been analysed. The main
vegetation changes described by biome reconstructions are the northern shift
of the Northern Hemisphere forest belts, in particular a northward
displacement of the taiga–tundra boundary, and the decrease of the desert
areas compared to pre-industrial time slice. According to the BIOME6000 records, grassy
vegetation reached at least up to 26<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N at 6 ka, far into the modern
central Sahara (Fig. 7). For none of the models is this biome shift
reproduced, neither in the PFT-based (Fig. 7) nor in the climate-based biome
distributions (not shown). The mean Sahara desert border shifts northward by
one to two grid cells in the biomisations (i.e. approximately 1.875 to 3.75<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>,
Table 4). This shift collocates with substantial reductions in the desert
fractions simulated by the individual ESMs (Fig. 8). Only in MPI-ESM-T63 is
vegetation  increased in the entire western and central Sahara, but this
increase is lower than 20 %, not leading to a change in the biome
assignment from desert to grassland. As the climate-based biomisations
performed with BIOME1 reveal a reduction of the Sahara desert area in the
same magnitude as the PFT-based ones, we conclude that the new biomisation
method shows a reasonable sensitivity to the simulated changes in the desert
fractions.</p>
      <p id="d1e2665"><?xmltex \hack{\newpage}?>For all models with the exception of MIROC-ESM, the PFT-based biomisation
reproduces an increased forest biome fraction in Eurasia north of
60<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N during the mid-Holocene compared to pre-industrial time slice, in line
with the biome reconstructions (Table 5). However, the magnitude of the change
differs between the models, ranging from 0 % within MIROC-ESM to 12 %
within CLIM-LPJ. For nearly all models (except for MIROC-ESM), the expansion
<?pagebreak page348?>of the forested area in the high northern latitudes seen in the PFT
biomisation is of similar magnitude to that in the climate-based biomisation,
confirming that the method covers past vegetation changes with reasonable
sensitivity.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p id="d1e2681">Position of the desert margin (<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude) in north Africa at
PI and 6 ka and the differences in position of the desert margin between 6 ka and
PI (<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude), for the PFT-based biomisations and the
climate-based biomisations. The desert margin is here defined as latitude at
which the zonal mean desert biome fraction averaged over the region
15<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W to 30<inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E exceeds 50 %.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right" colsep="1"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center" colsep="1">PFT-based </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col7" align="center">Climate-based </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">PI</oasis:entry>
         <oasis:entry colname="col3">6 ka</oasis:entry>
         <oasis:entry colname="col4">6 ka–PI</oasis:entry>
         <oasis:entry colname="col5">PI</oasis:entry>
         <oasis:entry colname="col6">6 ka</oasis:entry>
         <oasis:entry colname="col7">6 ka–PI</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">MPI-ESM-T63</oasis:entry>
         <oasis:entry colname="col2">17.72</oasis:entry>
         <oasis:entry colname="col3">21.45</oasis:entry>
         <oasis:entry colname="col4">3.73</oasis:entry>
         <oasis:entry colname="col5">15.85</oasis:entry>
         <oasis:entry colname="col6">19.59</oasis:entry>
         <oasis:entry colname="col7">3.74</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CLIM-LPJ</oasis:entry>
         <oasis:entry colname="col2">15.85</oasis:entry>
         <oasis:entry colname="col3">17.72</oasis:entry>
         <oasis:entry colname="col4">1.87</oasis:entry>
         <oasis:entry colname="col5">17.72</oasis:entry>
         <oasis:entry colname="col6">21.45</oasis:entry>
         <oasis:entry colname="col7">3.73</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HadGEM2-ESM</oasis:entry>
         <oasis:entry colname="col2">13.99</oasis:entry>
         <oasis:entry colname="col3">15.85</oasis:entry>
         <oasis:entry colname="col4">1.86</oasis:entry>
         <oasis:entry colname="col5">13.99</oasis:entry>
         <oasis:entry colname="col6">15.85</oasis:entry>
         <oasis:entry colname="col7">1.86</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MIROC-ESM</oasis:entry>
         <oasis:entry colname="col2">16.7</oasis:entry>
         <oasis:entry colname="col3">20.41</oasis:entry>
         <oasis:entry colname="col4">3.71</oasis:entry>
         <oasis:entry colname="col5">16.7</oasis:entry>
         <oasis:entry colname="col6">20.41</oasis:entry>
         <oasis:entry colname="col7">3.71</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><caption><p id="d1e2885">Mean forest biome fraction in northern Eurasia (60–80<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 0–150<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) in the PFT-based biomisations and the climate-based
biomisations for the mid-Holocene (6 ka) and pre-industrial (PI) time slice,
and the difference between both (6 ka–PI).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right" colsep="1"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col4" align="center" colsep="1">PFT-based </oasis:entry>
         <oasis:entry rowsep="1" namest="col5" nameend="col7" align="center">Climate-based </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">PI</oasis:entry>
         <oasis:entry colname="col3">6 ka</oasis:entry>
         <oasis:entry colname="col4">6 ka–PI</oasis:entry>
         <oasis:entry colname="col5">PI</oasis:entry>
         <oasis:entry colname="col6">6 ka</oasis:entry>
         <oasis:entry colname="col7">6 ka–PI</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">MPI-ESM-T63</oasis:entry>
         <oasis:entry colname="col2">0.73</oasis:entry>
         <oasis:entry colname="col3">0.75</oasis:entry>
         <oasis:entry colname="col4">0.02</oasis:entry>
         <oasis:entry colname="col5">0.73</oasis:entry>
         <oasis:entry colname="col6">0.76</oasis:entry>
         <oasis:entry colname="col7">0.03</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CLIM-LPJ</oasis:entry>
         <oasis:entry colname="col2">0.64</oasis:entry>
         <oasis:entry colname="col3">0.76</oasis:entry>
         <oasis:entry colname="col4">0.12</oasis:entry>
         <oasis:entry colname="col5">0.67</oasis:entry>
         <oasis:entry colname="col6">0.77</oasis:entry>
         <oasis:entry colname="col7">0.1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HadGEM2-ESM</oasis:entry>
         <oasis:entry colname="col2">0.83</oasis:entry>
         <oasis:entry colname="col3">0.89</oasis:entry>
         <oasis:entry colname="col4">0.06</oasis:entry>
         <oasis:entry colname="col5">0.89</oasis:entry>
         <oasis:entry colname="col6">0.93</oasis:entry>
         <oasis:entry colname="col7">0.04</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MIROC-ESM</oasis:entry>
         <oasis:entry colname="col2">0.72</oasis:entry>
         <oasis:entry colname="col3">0.72</oasis:entry>
         <oasis:entry colname="col4">0.0</oasis:entry>
         <oasis:entry colname="col5">0.92</oasis:entry>
         <oasis:entry colname="col6">0.96</oasis:entry>
         <oasis:entry colname="col7">0.04</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3067">Overall, the biome distributions for the mid-Holocene compare equally well to
the reconstruction as they do for the pre-industrial time slice (Fig. 9). Although
<inline-formula><mml:math id="M97" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> is similarly low, ranging from 0.17 for the CLIM-LPJ biomisation
to 0.38 for the MPI-ESM-T63 biomisation (poor agreement), the spread in the
models and the differences in <inline-formula><mml:math id="M98" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> between the PFT-based biomisations
and the climate-based biomisations is nearly identical to the results for
the pre-industrial biome distributions. In line with the results for PI, the
BNS indicates a good to very good agreement to the biome reconstructions
(ranging from 0.44 for MIROC-ESM to 0.72 for MPI-ESM-T63). The skill to
capture the reconstructed individual mega-biomes strongly depends on the
number of available pollen records; thus, temperate and boreal forests are
represented best (Fig. 7), while the simulated savanna regions are not
supported by the biome reconstructions.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F9" specific-use="star"><caption><p id="d1e3086">Metrics quantifying the agreement of the simulated mid-Holocene
biome maps based on the PFT method or based on the climate states (i.e.
according to the BIOME1 model) with the pollen-based biome reconstructions
(BIOME6000 database) for the mid-Holocene time slice, i.e. the (total) kappa
value (left panel) and the BNS values for the individual
mega-biomes.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f09.png"/>

        </fig>

      <p id="d1e3095">For the Last Glacial Maximum time slice, five different simulations have been
analysed. According to BIOME6000, the main reconstructed vegetation
differences at LGM compared to PI are a strong equatorward retreat of the
forest biomes and an expansion of tundra and steppe regions. The northernmost
record indicating boreal forest during LGM is located at approximately
51<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N in Asia (Fig. 10). The PFT biomisations mostly reproduce this
reduction and the shift in Northern Hemisphere forest biomes (Fig. 10),
though the extent of the shift is underestimated. Forest reaches up to
50<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (for CLIMBER) to 65<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (for MPI-ESM-T63). The boreal
forest position in the MIROC-ESM biomisation is not much changed compared to
PI, but the boreal forest nearly replaces the temperate forest biome.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F10" specific-use="star"><caption><p id="d1e3127">Pollen-based biome reconstructions (BIOME6000 database) for the
Last Glacial Maximum time slice and the simulated biome distributions
according to the new biomisation method (i.e. the PFT-based method).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f10.png"/>

        </fig>

      <p id="d1e3137">The overall agreement of the PFT-based biome distributions with the biome
reconstructions is rather fair but in line with the results for the
climate-based biome distributions. <inline-formula><mml:math id="M102" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> ranges from 0.07 for MPI-ESM-T31
to 0.23 for CLIMBER, only indicating a poor similarity of the biome maps and
records (Fig. 11). The BNS ranges from 0.24 (for MIROC-ESM) to 0.57 (for
MPI-ESM-T63) revealing a fair to good agreement. The values for both metrics
are in the same magnitude as for the climate-based biomisations. Similar to
the PI time slice, neither the complexity nor the spatial resolution is
the main reason for the differences between the PFT biomisations. The spread
in the skill of representing the individual biomes is large, and no
systematic bias for one model can be found. With the exception of the
biomisation for CLIMBER, the savanna biome is misrepresented in all
biomisations, independent of whether the PFT-based or the climate-based
method was used. Within the model ensemble, tropical and temperate forest can
be reproduced best.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><caption><p id="d1e3149">Metrics quantifying the agreement of the simulated Last Glacial
Maximum biome maps based on the PFT method or based on the simulated climate
states (i.e. according to BIOME1) with pollen-based biome reconstructions
(BIOME6000 database), i.e. the (total) kappa value and the BNS values for
the individual mega-biomes. Please notice that the climatic variables needed
to force BIOME1 could not be provided for IPSL-ESM-T63. Thus, no
climate-based biomisation exists for IPSL-ESM-T63.</p></caption>
          <?xmltex \igopts{width=483.69685pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f11.png"/>

        </fig>

</sec>
</sec>
<?pagebreak page350?><sec id="Ch1.S4">
  <title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <title>Caveats in the method</title>
      <p id="d1e3170">Even if the biomisation is restricted to mega-biome level, no clear
definitions exist to distinguish biomes in terms of plant functional type
compositions. While the bioclimatic limits used in the biome models are based
on empirical analysis, no equivalent classification regulates the biomisation
of PFTs. We particularly face this problem in finding a meaningful threshold
of maximum tree cover needed for defining forests. When is an accumulation of
trees identified as forest? As models tend to underestimate the forest
coverage and forest extent in the high northern latitudes (cf. Loranty et
al., 2013), we choose the assumption of tree cover being just dominant in
forested grid cells, although this limit is very low. We test other limits
(e.g. absolute dominance, i.e. fractional coverage exceeding 50 %), but
these work worse for most simulations used in this study as well as for other
simulations.</p>
      <p id="d1e3173">The mega-biome “warm–temperate forest” (e.g. subtropical forest) includes
PFTs that can be assigned to several biomes and is rather defined by a
coexistence of certain PFTs. For instance, in the BIOME4 model, it is not
only defined by the dominance of temperate evergreen broadleaved trees but
can also be defined by a dominance of cool conifers (with a sub-PFT of
temperate evergreen broadleaved trees). The cool conifers – in turn – are
also part of temperate forest biomes. Given the limited number of PFTs in the
DGVMs, the confinement of biomes via PFT mixtures is not possible. As biome
models such as BIOME4 generally manage to simulate warm–temperate forests at
the correct locations, we adopt the bioclimatic limits from BIOME4 (limit for
temperate evergreen broadleaved trees) for defining this mega-biome.
Nevertheless, the calculated warm–temperate forest distribution strongly
disagrees with the reference datasets. The reconstructed biome
“warm–temperate forest” shares some subtropical PFTs with the tropical
evergreen forest (Ni et al., 2010). These biomes are quite different in key
species, but not on genus or family level, on which the pollen identification
in the reconstructions is performed. Thus, these biomes tend to overlap in
some regions and are sometimes mixed up in reconstructions (Chen et al.,
2010). In addition, this mega-biome includes the warm–temperate
rainforest and the wet sclerophyll forest and woodland in the BIOME6000
reconstructions (cf. Harrison, 2017), which may not be able to be identified
with our biomisation method. Regarding the modern reference of RF99, we
decided to assign the biome “temperate needleleaf evergreen forest and
woodland” of the RF99 dataset to the mega-biome “temperate forest”,
although this biome is also located, e.g. in the southern US, which should be
assigned to the warm–temperate forest. Therefore, the evaluation of this
method with respect to warm–temperate forest might be ambiguous. Furthermore,
warm–temperate forests are small and rather patchily distributed and are thus
rarely dominant in the coarse grid cells to which the RF99 reference had to
be interpolated to. The coarser the grid is, the more warm–temperate forest
regions get lost during the interpolation. Therefore, the
warm–temperate forest biome is generally better represented for models using
a higher spatial resolution (i.e. MPI-ESM-T63, CLIM-LPJ and IPSL-ESM-T63).</p>
      <?pagebreak page351?><p id="d1e3176">In addition, not all biomes can be differentiated by the structural
composition or climatic tolerance. The biome “savanna” is the
second-largest ecosystem in the tropics, covering approximately one-fifth of
the global land surface (Scholes and Hall, 1996). It occurs in climatic zones
that are also suitable for forest and grasslands (Lehmann et al., 2011) and
is thus very variable regarding the plant composition. Tree fraction can vary
from very dense (open forest savanna) to nearly zero (Torello-Raventos et
al., 2013). While tropical savannas require the coexistence of trees and C4
grass, they can only be distinguished from forests by their unique functional
ecology, fire tolerance and shade intolerance (Ratnam et al., 2011). These
features make savannas unstable and vulnerable to changes in, e.g. grazing,
fire regime and climate, transforming savannas into forest or grasslands
(Franco et al., 2014). The functional diversity of savannas is not adequately
included in DGVMs nor considered in the biomisation method presented here. As
even C4 grass is not simulated in all models, we had to define the savanna
biome in a very rudimentary manner by a mixture of woody PFTs and grass and
by bioclimatic limits, i.e. a mean temperature of the coldest month exceeding
10<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> which is taken as a limit for C4 grass in dynamic vegetation
models (e.g. Jena Scheme for Biosphere Atmosphere Coupling in Hamburg;
JSBACH; cf. Reick et al.,
2013). The savanna biome might therefore not be represented well. At least in
the palaeo-simulations, most biomisations do not capture the reconstructed
savanna area, but this may partly also be related to the fact that only few
records exist indicating savanna during LGM and 6 ka. Modern pollen rain
analysis reveals that woody plant taxa typically characterising savannas are
underrepresented or even absent in the pollen/vegetation ratios. Given the
lack of savanna indicators, this biome may be overlooked in fossil pollen
records (Jones et al., 2011).</p>
      <p id="d1e3188">Similar to dynamic vegetation models, the priority in the biomisation
procedure is given to forest biomes. It is first tested whether forest
biomes are suitable for covering the grid cell, before the savanna is
distributed. Grasslands and tundra are assigned to the residual grid cells,
independent of the real grassy PFT cover fractions. The only restriction is a
total vegetation coverage exceeding 10 % for tundra or 20 % for
grassland to be distinguishable from deserts. This method has the large
disadvantage that biases in the forest distribution propagate throughout the
assignment of all biomes with the exception of deserts. The forest biome
distribution calculated for the different models is further tested in
Sect. 4.3 for the pre-industrial time slice.</p>
      <p id="d1e3192">Another problem is the inclusion of anthropogenic plant functional types
(i.e. land use) in some simulations, making the biome distribution less
comparable to the reference data. Although land use is often prescribed in
the models, this process cannot be reversed in the final output data. The
area chosen for land use is historically determined and is based on human
decisions and not primarily on climate conditions. These<?pagebreak page352?> human pathways
cannot be reproduced in simple biomisation methods nor in the current
dynamic vegetation models. We artificially rescale the natural vegetation in
human-affected regions by redistributing the fraction of anthropogenic PFT
coverage proportionally to the natural PFTs. This is a very simple approach
and only partly in line with the implementation of land use in the dynamic
vegetation models. For instance, within JSBACH, pasture is preferentially
assigned to natural grasslands; forests are only affected if prescribed
pasture fraction exceeds the natural grassland area (cf. Reick et al.,
2013). This rule is plausible but not reversible and therefore not
appropriate for the biomisation method presented here. The results show that
biome maps based on models including land use do not agree worse with the
references than the other simulations, underlining that the redistribution
method used here provides a good approximation of the natural vegetation
cover.</p>
      <p id="d1e3195">The method of PFT biomisation basically uses bioclimatic limits that have
been inferred for the modern vegetation–climate relationships. These limits
may not be valid for all time periods. During LGM, the atmospheric
<inline-formula><mml:math id="M104" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration was substantially lower than today, which may
also affect the response of the plants to the background climate. Likewise,
the matrices for the assignment of taxa into PFTs and from PFTs into biomes
have been constructed on the basis of the recent vegetation. These matrices
do not have to be constant in time; i.e. they may not be applicable for
glacial vegetation. Furthermore, the classification of the biomes itself
corresponds to the modern vegetation and does not necessarily have to reflect
the palaeo-vegetation. There might be other biomes in glacial climates that
remain unconsidered. This may lead to biases in the modelling results and the
biome reconstructions taken as reference. The <inline-formula><mml:math id="M105" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> values for the LGM
time slice were quite low, indicating disagreement between the simulated and
reconstructed biome distributions.</p>
      <p id="d1e3216">A rather technical problem is the interpolation of the PFT distributions to
the T31 or T63 grid that partly leads to a decrease in the global area to be
compared with the reference datasets due to a mismatch of the
land–sea masks. In regions with a strong change of the PFT fractional
composition (e.g. desert border, coastal region), the interpolation may
produce blurry transitions in the PFT distributions resulting in an
erroneous conversion into the mega-biomes.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <title>Biases in the pre-industrial biome distributions and the influence of
the climate background</title>
      <p id="d1e3225">The classical method of biomising climate states via biome models (here
BIOME1 by Prentice et al., 1992) and the new PFT-based method result in
similar biome distributions for most models and all time slices. Generally,
the PFT-based method produces more forest in comparison with the classical
approach. This is mainly related to the rather low limit of forest fraction
needed in the assignment of forest in the PFT-biomisation procedure. In
forest regions, where Earth system models tend to produce large biases in
the climate state, the PFT-based approach may be more suitable for the
biomisation. Therefore, the tropical, warm–temperate and boreal forests are
probably better represented by the PFT method. However, the biomisation of
the PFT distributions itself strongly depends on the underlying climate,
affecting both the differentiation into the biomes as well as the simulation
of the PFT coverage in the different dynamic vegetation models. To
accurately compare the performance and the skill of the different vegetation
models to represent biome distributions, the models should therefore be
forced by the same climate state, but only few models can be run offline.
This study is thus not thought of as a model evaluation but as an introduction to
the biomisation method and as a test of whether the procedure works for models of
different complexity and simulations for different time slices.</p>
      <p id="d1e3228">To assess the contribution of the effect of biases in the underlying climate
to the differences in the PFT-based biomisations and the references, we
compare the pre-industrial climate-based biomisations with the biomisation of
the CRU TS4 dataset. A sensitivity study is performed following Dallmeyer et
al. (2017) to relate differences in the biome distributions to precipitation
or temperature deviations in the background climate (Fig. 12). For this
purpose, we successively replace the temperature or the precipitation in the
CRU TS4 forcing file for the BIOME1 model with the respective pre-industrial
temperature or precipitation distributions simulated by the models.
Afterwards, we compare the differences between the calculated biome
distributions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12" specific-use="star"><caption><p id="d1e3233">Climate factors leading to the differences between the
pre-industrial climate-based biome distributions and the biome distribution
inferred from the CRU TS4 observational climate data. The factors were
calculated by performing a sensitivity test with the BIOME1 model following
Dallmeyer et al. (2017) by successively replacing the temperature or the
precipitation in the CRU TS4 forcing file for BIOME1 with the respective
data from the different PI simulations.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f12.png"/>

        </fig>

      <p id="d1e3242">Generally, disagreement in the high northern latitudes is associated with
biases in temperature, while disagreement in low latitudes co-occurs with
precipitation biases for the pre-industrial time slice. The similarity of the
PFT biomisations and RF99 is lowest for CLIMBER, MIROC-ESM and CLIM-LPJ.
While for CLIMBER the coarse resolution (i.e. the very different land–sea
masks) may be the main responsible factor for disagreement, total <inline-formula><mml:math id="M106" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula>
is reduced by an underestimation of grasslands and savanna and an
overestimation of the forests in the PFT-based biomisation of MIROC-ESM. This
is exactly opposite to the biases occurring in the climate-based biomisation,
indicating that the climate is not the primary origin of the differences. For
this specific model, the PFT-based biomisation strongly differs from the
climate-based one. This may at least partly be related to the handling of
vegetation in the model. The spatially explicit individual-based (SEIB)
vegetation model included in MIROC-ESM is a forest gap model, not using the
tiling approach (Sato et al., 2007). PFT fractions have only been estimated
during the CMIP5 post-processing, based on the net primary productivity
ratios of the different vegetation categories. This approach might lead to an
overestimation of forest. On the other hand, according to BIOME1, the
underestimation of the tropical forest domain in the climate-based
biomisation of MIROC-ESM is caused by the way to dry climate in South
America.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13" specific-use="star"><caption><p id="d1e3255">Zonal sum of pre-industrial forest biome area per latitude
(million km<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> degree<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) in the reference (RF99),
the climate-based biomisation (blue) and the PFT-based biomisation (red) for
each of the individual models. Due to the special land–sea mask in CLIMBER,
the values for this model have been scaled by a factor of 0.766, which is the
quotient of the global land area in a Gaussian T31 grid and the global land
area in the CLIMBER grid (<inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=332.897244pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f13.png"/>

        </fig>

      <p id="d1e3305">In the PFT biomisation of CLIM-LPJ, <inline-formula><mml:math id="M110" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> is basically reduced by an
overestimation of boreal forest at the expense of temperate forest and an
underestimation of the savanna regions. Both errors are mainly not climate
driven. Within dynamic vegetation models explicitly calculating boreal and
temperate forest, these forest types can coexist. To give a clear assignment,
we decided to differentiate both forest types by the dominant tree PFT, i.e.
if the boreal tree fraction exceeds temperate tree fraction, forest fraction
is assigned to boreal forest, and vice versa. This partly disagrees with the
handling in biome models; e.g. in cool mixed forest, boreal trees could be
the dominant PFT and temperate trees only the subdominant PFT (cf. Kaplan et
al., 2003), but this biome would be assigned to the mega-biome “temperate
forest”. We assume that due to a slight overestimation of boreal forest
coverage in Europe and at the modern boreal to temperate forest transition
zone within CLIM-LPJ, the vegetation in these regions is grouped into the
mega-biome “boreal forest”. In South America, tropical forest fraction is
overestimated by CLIM-LPJ, with values exceeding 80 % in most regions of
Brazil, precluding the savanna biome. Within north Africa, CLIM-LPJ simulates
hardly any regions with coexisting substantial forest and grass fractions.
Either tropical trees are clearly the dominant PFT (assigned to tropical
forest) or forest fraction is too low (below 10 %) to be assigned<?pagebreak page354?> to
savanna. The defined limits for savanna are only fulfilled for very few
grid cells.</p>
      <p id="d1e3315">For MPI-ESM-T31, the boreal forest biome is strongly underestimated in the
PFT-based biomisation. The BIOME1 results clearly relate this bias to a
too-cold climate (GDD5 limit is not reached in BIOME1), which also affects the
simulation of trees in JSBACH sharing the same bioclimate limits. Therefore,
forest fraction in MPI-ESM-T31 is underestimated for the northern latitudes.</p>
      <p id="d1e3318">IPSL-ESM-T31 shows a dry bias in South America resulting in a too-low
tropical forest biome cover in both the climate-based and the PFT-based
biomisations. BIOME1 reveals another systematic bias for the MIROC-ESM
biomisation indicating too much temperate forest in North America at the
expense of grassland and partly of boreal forests. This overestimation of
temperate forest is induced by a too-wet climate favouring growing of trees
and a rather too-warm climate in the high northern latitudes.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>Evaluating the distribution of forest biomes</title>
      <p id="d1e3327">Due to the forest priority rule in the biomisation method, the skill of
representing the non-forested biomes depends on how well the forest
distribution can be reproduced. To further assess the performance of the
method with respect to the forest biomisation, we analyse the pre-industrial
zonal mean forest fraction in the form of the zonal sum of forested area per
latitude to be independent of the different grid sizes used for the
individual simulations (Fig. 13). In nearly all PFT biomisations, the zonal
forest fraction is underestimated in the high northern latitudes and the
zonal maximum is shifted southward, although the defined limit of minimum
required tree fraction is already quite low in the PFT method. This bias is
most obvious in the biomisation for MPI-ESM-T31 and IPSL-ESM-T63. While for
MPI-ESM-T31, the coexistence of the bias in both the climate-based and the
PFT-based biomisations underlines the effect of the too-cold climate on the
forest distribution, the strongly shifted high-latitude forest maximum in the
IPSL-ESM-T63 PFT biomisation is probably not climate driven.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14"><caption><p id="d1e3332">Normalised Taylor diagram showing the agreement of the simulated
pre-industrial zonal sum of forest biome area per latitude using BIOME1 (i.e.
based on the simulated climate states; crosses) or the PFT-based method
(dots) for the individual models with the modern potential biome
distributions according to Ramakutty and Foley (1999, RF99). Additionally
shown is the agreement of the CRU TS4-based biomisation with this RF99
reference dataset.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f14.png"/>

        </fig>

      <?pagebreak page355?><p id="d1e3341">In the tropical regions, the forest fraction tends to be underestimated when
using the climate-based method, whereas forest fraction is often too high in
the PFT-based biomisations, probably related to the low tree fraction
limit needed for forest assignment in the PFT method. The tropical forest
fraction based on the simulated climate and PFT distribution by CLIMBER is
strongly overestimated. This is at least partly caused by the coarse grid
and specific land–sea mask used in the model.</p>
      <p id="d1e3344">To further quantify the biases in forest fraction, we compare the centred
root mean square error (cRMSE), the Pearson correlation coefficient (<inline-formula><mml:math id="M111" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula>) and
the zonal variability between the biomisations of the ESM simulations and the
RF99 reference, combined in a Taylor diagram (Fig. 14). Overall, the zonal
forest fraction in the biomisations agrees well with the reference. All
biomisations show a good to nearly perfect pattern correlation with values
exceeding 0.77, independent of the chosen method. For most models, the
Pearson correlation coefficient even exceeds 0.9. The PFT-based biomisation
is worst for CLIMBER and MIROC-ESM, revealing a too-large standard deviation
and a cRMSE of 0.83 and 0.73, respectively. For MPI-ESM-T31, spatial
variability is slightly too low and the cRMSE is 0.61 using the PFT-based
method and 0.63 in the climate-based biomisation, reflecting the common
underestimation of the boreal forest. As expected, best performance can be
observed for the biomisations based on simulations with prescribed PFT
coverage (MPI-ESM-T63 and IPSL-ESM-T31), sharing a similar standard deviation
with RF99, a pattern correlation coefficient of 0.98 and a cRMSE of 0.21,
which is even better than the biomisation of the CRU TS4 data (cRMSE of 0.28).</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Summary and conclusion</title>
      <p id="d1e3362">Dynamic global vegetation models use different kinds and numbers of plant
functional types to represent the global vegetation. These PFT distributions
can neither be directly compared between different models nor between models
and reconstructions, which were hitherto mostly provided in the form of biomes.
We have therefore  developed a method for biomising simulated PFT
distributions and have tested this method for six state-of-the-art dynamic
global vegetation models based on simulations for the pre-industrial,
mid-Holocene and Last Glacial Maximum time slices.</p>
      <p id="d1e3365">Overall, the method works well for all models and can keep up with other
biomisation techniques. The comparison with different reference datasets
(i.e. pollen-based biome reconstructions and estimates of the potential
natural vegetation) reveals a similar agreement with the PFT-based
biomisation than with biome distributions inferred from the biome model
BIOME1 (Prentice, 1992) that has been forced with the background climates.
The comparable skill to the BIOME1 model, which is tuned to represent the
global vegetation as well as possible, is partly achieved by the use of
bioclimatic limits that are in line with the definitions in biome models.</p>
      <p id="d1e3368">The skill of capturing the global biome distributions is independent of the
spatial resolution and the complexity of the vegetation models or the
integration of land use. For models just using two different PFTs (CLIMBER)
the method performs equally well as for models using 10 different PFTs
(e.g. IPSL-ESM). Only the very coarse resolution in the CLIMBER model
hampers the comparability with the single point reconstructions, in
particular for biomes with a very limited number of available records. In
addition, the quantitative comparison of the biomised vegetation
distributions among each other and with the gridded reference data is
complicated by the very different model resolutions.</p>
      <p id="d1e3371">In general, large biome belts (such as tropical forest) can be captured
best, while rather regionally confined biomes such as savanna and
warm–temperate forest are not as well represented. This may at least partly
be related to the fact that these biomes cannot be defined clearly via PFT
cover fractions. Savannas are characterised by a distinct functional ecology
and cannot be differentiated from other tropical biomes via plant
composition or climatic tolerance. The warm–temperate forest is rather
defined by a coexistence of PFTs and might overlap with other biomes. This
may lead to mismatches with the reconstructions. For the palaeo-simulations,
the agreement between the individual mega-biome distributions derived by the
PFT method and the<?pagebreak page356?> biome reconstructions strongly depends on the number of
available records. The main vegetation differences between the
pre-industrial and mid-Holocene or Last Glacial Maximum time slices are
captured by most models and are also reflected in the PFT- and climate-based
biomisations, indicating a reasonable sensitivity of the PFT method. In
total, the kappa statistic reveals only poor agreement between the PFT- and
climate-based biomisations and the reconstructions for LGM, which might be
related to the use of bioclimatic limits inferred from modern observations
that may not be valid for climate states being totally different from
the present day's.</p>
      <p id="d1e3375">We have provided a simple but powerful method for the biomisation of
simulated plant functional type distributions that requires only few input
variables and can hence be applied to all kinds of dynamic global vegetation
models. The new method can keep up with the classical biomisation approach of
forcing biome models with climate states. However, as the new biomisation of
the simulated PFT fractions indirectly accounts for all processes included in
the dynamic vegetation models (e.g. ecophysiological response of the plants
to changes in the environment such as atmospheric <inline-formula><mml:math id="M112" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> level), the
new method is able to more directly represent the output of the vegetation
modules of an Earth system model. The biomisation of the simulated vegetation
thus facilitates the direct comparison between different Earth system models
and between models and biome reconstructions. It is therefore a powerful
method for the evaluation of Earth system models, particularly suitable for
the assessment of recent palaeo-vegetation changes.</p><?xmltex \hack{\newpage}?>
</sec>

      
      </body>
    <back><notes notes-type="codeavailability">

      <p id="d1e3394">The PMIP3 simulations of MPI-ESM-T63,
ISPL-ESM-T31, MIROC-ESM and HadGEM2-ESM can be downloaded from the Earth
System Grid Federation. Simulation IDs are listed in Table 4. The tool for
the biomisation of PFT distribution, input data, other scripts used in the
analysis and supplementary information that may be useful in reproducing the
authors' work is archived by the Max Planck Institute for Meteorology and are
accessible without any restrictions
(<uri>http://hdl.handle.net/21.11116/0000-0001-B800-F</uri>, last access:
8 February 2019). The BIOME6000 pollen-based biome reconstructions (Harrison,
2017) can be downloaded from <uri>http://researchdata.reading.ac.uk/99/</uri>
(last access: 26 October 2018); the estimates of modern potential biome
distributions by Ramankutty and Foley (1999) are available at
<uri>https://nelson.wisc.edu/sage/data-and-models/global-potential-vegetation/index.php</uri>
(last access: 26 October 2018).</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<?pagebreak page357?><app id="App1.Ch1.S1">
  <title>Biomisation of the PFT distribution using the example of VECODE (included
in CLIMBER-2)</title>
      <p id="d1e3415">Figure A1 shows the PFT-biomisation procedure based on the VECODE model
(include in CLIMBER-2). VECODE includes only two PFTs; therefore, all rules
defined in the biomisation method are needed. For the other models using more
PFTs, the flow chart would look slightly different.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.F1"><caption><p id="d1e3420">The PFT-biomisation procedure using the
example of the VECODE model (included in CLIMBER-2), which has the fewest
PFTs. Shown are all decisions using assumptions on minimum coverage of the
PFTs and bioclimatic limitations, i.e. growing degree days on the basis of 0
and 5<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> (GDD0, GDD5), mean temperature of the coldest month (Tc) and
annual mean 2 m temperature. Please note that this chart looks different for
every other model.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=312.980315pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f15.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page358?><app id="App1.Ch1.S2">
  <title>Simulations</title>
      <p id="d1e3448">The MPI-ESM-P (Giorgetta et al., 2013) simulations have been performed at the
Max Planck Institute for Meteorology and include the land model JSBACH with
dynamic vegetation module (cf. Reick et al., 2013). In the pre-industrial
control simulation, vegetation pattern and land use were prescribed. For the
palaeo-simulations, we use the simulations with interactive vegetation. The
spatial resolution for the atmosphere and land is T63 (i.e.
approximately 1.875<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> on a Gaussian grid). These simulations are referred to
as MPI-ESM-T63 in the following. In a similar model setup, additional
PMIP3-like experiments have been undertaken for PI and LGM by Klockmann et
al. (2016) in a coarser spatial resolution (T31, i.e. approximately 3.75<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
on a Gaussian grid, MPI-ESM-T31).</p>
      <p id="d1e3469">IPSL-CM5A-LR (Dufresne et al., 2013) is the low-resolution CMIP5 model
version of the Institute Pierre Simon Laplace and contains the terrestrial
biosphere model ORCHIDEE (Krinner et
al., 2005) that is run offline, forced with climate input. In the PMIP3
simulations, vegetation and land use were prescribed. For better comparison
with the gridded reference dataset (see next section), the climate and PFT
fields have been interpolated bilinearly to a Gaussian T31 grid. Using the
simulated LGM climate of the PMIP3 simulation, Zhu et al. (2018) performed
additional experiments for LGM with ORCHIDEE-MICT (Guimberteau et al., 2018),
a model version with an improved vegetation dynamic in the high northern
latitudes (Zhu et al., 2015). The corresponding PI control simulation has
been forced by CRUNCEP v.5.3.2 data, which are a combination of observations
(CRU data) and reanalysis data (NCEP). The simulations have been interpolated
to a Gaussian T63 grid.</p>
      <p id="d1e3472">HadGEM2-ESM (Collins et al., 2011) is the Earth system model of the Met
Office Hadley Centre and includes the vegetation model TRIFFID (Cox, 2001).
In all simulations used here, the model ran with interactive vegetation. The
PI simulation (piControl) included land-use types. The simulations have been
remapped to a Gaussian T63 grid.</p>
      <p id="d1e3475">The dynamic vegetation LPJ model (Sitch et al., 2003) is usually used for
offline simulations, forced by climate simulations or observations. The
simulations used here have been conducted in a similar model setup to that
described in Kleinen et al. (2010) but has been redone on a new computer
(Thomas Kleinen, personal communication, 2017), which may lead to very small
deviations from the original runs. The PI simulation has been forced by
observational datasets (CRU TS3.1; Harris et al., 2014), the 6 ka simulation
by output from the CLIMBER-2 model. Both simulations have been interpolated
to a Gaussian T63 grid and are referred to as CLIM-LPJ in the following text.</p>
      <p id="d1e3479"><?xmltex \hack{\newpage}?>MIROC-ESM (Watanabe et al., 2011) is the Earth system model of the Japan
Agency for Marine-Earth Science and Technology, Atmosphere and Ocean Research Institute (University of
Tokyo) and the National Institute for Environmental Studies. It includes the
SEIB dynamic vegetation model  (Sato et al., 2007). SEIB deviates from the
other DGVMs in this study as it does not use the tiling approach of
calculating PFT fractional coverage for each grid cell. It is a so-called
gap model, simulating the interactions among individual trees that compete
for light and space in arising gaps (e.g. due to disturbances) within a
spatially explicit virtual forest. The model was built for capturing the
vegetation dynamics on a local scale. The application of the model for larger
(e.g. global) scales is possible, but global simulations partly disagreed
with observations (Sato et al., 2007). The PFT distribution used in this
study has been calculated in the post-processing for CMIP5 via the relative
net primary productivity of the vegetation categories; it was not explicitly
calculated by the model, which may lead to additional biases in the
vegetation distribution. The simulation for PI (piControl) includes land use.
These simulations have been remapped to a Gaussian T31 grid.</p>
      <p id="d1e3483">CLIMBER-2 (Petoukhov et al., 2000) is an Earth system model of intermediate
complexity and contains the vegetation module VECODE (Brovkin et al., 1997).
The LGM and PI simulations have been specifically undertaken for this study
(Thomas Kleinen, personal communication, 2017) and are referred to as CLIMBER
in the following. The CLIMBER output has not been interpolated as the
simulation ran with a too-coarse resolution of 10<inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>
latitude <inline-formula><mml:math id="M117" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 51<inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> longitude. To compare with the data and the
other models, the CLIMBER output was regridded to
<inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>×</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid without interpolation.</p>
      <p id="d1e3533">The dynamic global vegetation model CLM-DGVM as part of the Community
Earth System Model (Hurrell et al., 2013) is currently under redevelopment.
No appropriate simulations could be provided.</p><?xmltex \hack{\newpage}?>
</app>

<?pagebreak page359?><app id="App1.Ch1.S3">
  <title>Preparing the reference datasets</title>
      <p id="d1e3543">Most biomes used in RF99 could directly be assigned to the mega-biome types
used in this study (Table C1). RF99 additionally includes the biome
“evergreen/deciduous mixed forest/woodland”. Here, this biome is assigned
to the mega-biomes “temperate forest” in warm regions and “boreal forest”
in colder regions via the modern growing degree day distribution
(GDD5 <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/></mml:mrow></mml:math></inline-formula>900 <inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for warm regions,
GDD5 &lt; 900 <inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for cold regions; cf. Table 2), derived from
observations (University of East Anglia Climatic Research Unit Time
Series 3.1, University of East Anglia, 2008). Likewise, the savanna biome had
to be split up, as RF99 includes temperate savanna which is explicitly
excluded in the definition of the savanna mega-biome used in this study. The
threshold for warm savanna is a mean temperature of the coldest month
exceeding 10 <inline-formula><mml:math id="M123" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (limit for existence of C4 grass in JSBACH). To
compare RF99 with the different model simulations, RF99 had to be remapped to
the model grids. We decided to use the spatial resolutions T31 and T63, and
also prepared a map for the downscaled CLIMBER output (<inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid). Within each of these model grid cells, the dominant
mega-biome type in the 5 min resolved RF99 data was taken for covering the
RF99 grid box in T31 or T63 or in the 10<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grid. In more detail, each
grid box on a T31 Gaussian grid contains 45 <inline-formula><mml:math id="M126" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 45 grid cells of the
5 min resolved RF99 data. Within these 45 <inline-formula><mml:math id="M127" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 45 grid boxes, the
fractional coverage of all mega-biomes is calculated and the biome with the
highest fraction is chosen for covering the T31 grid box. For T63,
arithmetically 22.5 <inline-formula><mml:math id="M128" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 22.5 grid cells form one T63 grid cell. Here,
we take 23 <inline-formula><mml:math id="M129" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 23 RF99 grid boxes with one grid-box overlap to equally
distribute the 5 min grid cells to the T63 grid. We are aware of the fact
that the latitudes in the Gaussian grids are actually not equidistant, so
that the remapped RF99 biome distributions are slightly stretched towards the
poles, but this effect is marginal and is not expected to shift the main
biome belts. To compare the equal number of grid cells, the reference data
are cut by the land–sea masks used in the individual simulations to only
include grid cells that are on land in both datasets.</p><?xmltex \hack{\newpage}?><?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.T1"><caption><p id="d1e3643">Biome assignment of biome classes used in Ramankutty and
Foley (1999) to the mega-biomes used in this study.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="105.275197pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="113.811024pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Biomes in Ramankutty and<?xmltex \hack{\hfill\break}?>Foley (1999)</oasis:entry>
         <oasis:entry colname="col2">Mega-biomes</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">1. Tropical evergreen<?xmltex \hack{\hfill\break}?>forest/woodland</oasis:entry>
         <oasis:entry colname="col2">Tropical forest</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">2. Tropical deciduous<?xmltex \hack{\hfill\break}?>forest/woodland</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">3. Temperate broadleaf evergreen forest/woodland</oasis:entry>
         <oasis:entry colname="col2">Warm–temperate forest</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">4. Temperate needleleaf evergreen forest/woodland</oasis:entry>
         <oasis:entry colname="col2">Temperate forest</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">5. Temperate deciduous<?xmltex \hack{\hfill\break}?>forest/woodland</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">6. Boreal evergreen<?xmltex \hack{\hfill\break}?>forest/woodland</oasis:entry>
         <oasis:entry colname="col2">Boreal forest</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">7. Boreal deciduous<?xmltex \hack{\hfill\break}?>forest/woodland</oasis:entry>
         <oasis:entry colname="col2"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">8. Evergreen/deciduous<?xmltex \hack{\hfill\break}?>mixed forest/woodland</oasis:entry>
         <oasis:entry colname="col2">Temperate (GDD5 &lt; 900 <inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) or boreal forest</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">9. Savanna</oasis:entry>
         <oasis:entry colname="col2">Savanna and dry woodland, partly temperate forest</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">10. Grassland/steppe</oasis:entry>
         <oasis:entry colname="col2">Grassland and dry shrubland</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">11. Dense shrubland</oasis:entry>
         <oasis:entry colname="col2">Savanna and dry woodland</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">12. Open shrubland</oasis:entry>
         <oasis:entry colname="col2">Grassland and dry shrubland</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">13. Tundra</oasis:entry>
         <oasis:entry colname="col2">Tundra</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">14. Desert</oasis:entry>
         <oasis:entry colname="col2">(Warm) desert</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">15. Polar desert/rock/ice</oasis:entry>
         <oasis:entry colname="col2">Polar desert/ice</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page360?><app id="App1.Ch1.S4">
  <title>Simulated forest in South America</title>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.T2"><caption><p id="d1e3838">Modern (PI) fraction of the biome “tropical forest” in South
America, given in percent of land area in the region of
57<inline-formula><mml:math id="M131" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–13<inline-formula><mml:math id="M132" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 33–81<inline-formula><mml:math id="M133" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W. Listed are the reference
forest fraction based on RF99, which changes due to the interpolation to the
different model grids, the forest fraction based on the PFT biomisation and
that based on the classical approach using BIOME1 forced with the simulated
climate fields.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Model acronym</oasis:entry>
         <oasis:entry colname="col2">RF99</oasis:entry>
         <oasis:entry colname="col3">PFT-based</oasis:entry>
         <oasis:entry colname="col4">Climate-based</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">method</oasis:entry>
         <oasis:entry colname="col4">method</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">MPI-ESM-T63</oasis:entry>
         <oasis:entry colname="col2">56.85</oasis:entry>
         <oasis:entry colname="col3">57.72</oasis:entry>
         <oasis:entry colname="col4">27.53</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MPI-ESM-T31</oasis:entry>
         <oasis:entry colname="col2">58.52</oasis:entry>
         <oasis:entry colname="col3">61.0</oasis:entry>
         <oasis:entry colname="col4">31.13</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">IPSL-ESM-T31</oasis:entry>
         <oasis:entry colname="col2">59.75</oasis:entry>
         <oasis:entry colname="col3">40.28</oasis:entry>
         <oasis:entry colname="col4">7.87</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">IPSL-ESM-T63</oasis:entry>
         <oasis:entry colname="col2">57.51</oasis:entry>
         <oasis:entry colname="col3">59.03</oasis:entry>
         <oasis:entry colname="col4">59.58</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HadGEM2-ESM</oasis:entry>
         <oasis:entry colname="col2">58.03</oasis:entry>
         <oasis:entry colname="col3">64.95</oasis:entry>
         <oasis:entry colname="col4">42.72</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CLIM-LPJ</oasis:entry>
         <oasis:entry colname="col2">57.41</oasis:entry>
         <oasis:entry colname="col3">61.72</oasis:entry>
         <oasis:entry colname="col4">57.16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MIROC-ESM</oasis:entry>
         <oasis:entry colname="col2">58.45</oasis:entry>
         <oasis:entry colname="col3">53.08</oasis:entry>
         <oasis:entry colname="col4">15.45</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CLIMBER</oasis:entry>
         <oasis:entry colname="col2">75.45</oasis:entry>
         <oasis:entry colname="col3">59.73</oasis:entry>
         <oasis:entry colname="col4">59.73</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\clearpage}?>
</app>

<?pagebreak page361?><app id="App1.Ch1.S5">
  <title>Comparison of the biomisation method with the approach of Prentice et
al. (2011)</title>
      <p id="d1e4045">Prentice et al. (2011) introduced a biomisation method (further referred to
as the FPC method) that is fundamentally different from the method presented in
this study. The assignment to the different biomes is controlled by the
foliage projective cover, the vegetation height and the PFT composition.
Climatic limitations in the form of growing degree days are only used to
distinguish the tundra biomes.</p>
      <p id="d1e4048">Unfortunately, the foliage projective cover and the vegetation height are not
included in the standard output of the vegetation models and are therefore
not available for the simulations used here.</p>
      <p id="d1e4051">To compare both methods, we therefore only use the simulations performed
within IPSL-ESM-T63, which has been biomised by Zhu et al. (2018) following
the approach of Prentice et al. (2011). The biome output has been grouped
into mega-biomes and remapped to a T63 grid in the same way as the RF99
reference data were prepared.</p>
      <p id="d1e4054">Beside the savanna regions, the derived biome map resembles the map resulting
from the PFT-based method (Fig. E1). Prentice et al. distinguish between
temperate parkland, sclerophyll woodland and boreal parkland that all have
been assigned to the mega-biome savanna, but savanna is only defined as
tropical savanna in our method. This complicates the comparison of the biome
maps and leads to strong differences in the savanna distribution between both
methods and between the biomisation using the FPC method and RF99, although
we leave the temperate savanna in RF99 for better comparison.</p>
      <p id="d1e4058">Since boreal parkland is not included in RF99, the PFT method introduced here
yields better results for boreal forest and savanna than the FPC method.
Additionally, the warm–temperate forest is more appropriately reproduced. In
contrast, temperate forest and grassland are better represented using the FPC
method. All other biomes are equally well simulated for the PI time slice.</p><?xmltex \hack{\newpage}?><?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.T3"><caption><p id="d1e4064">Metrics quantifying the agreement of the biomisations for
IPSL-ESM-T63 based on the FPC method (Prentice et al., 2011) or the PFT-based
method introduced in this study with the modern potential biome distribution
according to Ramakutty and Foley (1999, RF99) or pollen-based biome
reconstructions (BIOME6000 database) for the pre-industrial (PI) and the Last
Glacial Maximum (LGM) time slices. Listed are the relative fractional skill
score (FSS), the kappa value (<inline-formula><mml:math id="M134" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula>) and the best neighbour score (BNS).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center" colsep="1">PI </oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center">LGM </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">FPC</oasis:entry>
         <oasis:entry colname="col3">PFT</oasis:entry>
         <oasis:entry colname="col4">FPC</oasis:entry>
         <oasis:entry colname="col5">PFT</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">method</oasis:entry>
         <oasis:entry colname="col3">method</oasis:entry>
         <oasis:entry colname="col4">method</oasis:entry>
         <oasis:entry colname="col5">method</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">FSS (vs. RF99)</oasis:entry>
         <oasis:entry colname="col2">0.1</oasis:entry>
         <oasis:entry colname="col3">0.13</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M135" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> (vs. RF99)</oasis:entry>
         <oasis:entry colname="col2">0.59</oasis:entry>
         <oasis:entry colname="col3">0.63</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M136" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> (vs. records)</oasis:entry>
         <oasis:entry colname="col2">0.19</oasis:entry>
         <oasis:entry colname="col3">0.24</oasis:entry>
         <oasis:entry colname="col4">0.17</oasis:entry>
         <oasis:entry colname="col5">0.13</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BNS (vs. records)</oasis:entry>
         <oasis:entry colname="col2">0.53</oasis:entry>
         <oasis:entry colname="col3">0.55</oasis:entry>
         <oasis:entry colname="col4">0.54</oasis:entry>
         <oasis:entry colname="col5">0.41</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e4225">The FSS metric (Table E1) indicates that the PFT-based method (0.13) agrees
in total slightly better with the reference than the other approach (0.10).
Overall, the biomisation using the FPC method reaches a <inline-formula><mml:math id="M137" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> of 0.59
(vs. 0.63 for the PFT-based method) compared to RF99 and 0.19 (vs. 0.24)
compared to the Biome6000 pollen data. BNS is 0.53 for the FPC method and
0.55 for the PFT method.</p>
      <p id="d1e4235">The LGM biome distribution can be captured slightly better using the FPC
method (<inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.17</mml:mn></mml:mrow></mml:math></inline-formula> vs. 0.13 and BNS <inline-formula><mml:math id="M139" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.54 vs. 0.41). Particularly the
tropical forest, desert and savanna biomes agree better with the biome
reconstructions than those for the PFT-based method, but at least for the latter
biomes, the record density is very low, which may distort the results.</p><?xmltex \hack{\clearpage}?><?xmltex \floatpos{t}?><fig id="App1.Ch1.F2" specific-use="star"><caption><p id="d1e4259">Comparison between the biomisation method by Prentice et al. (2011,
referred to as the FPC method) and the method introduced in this study
(PFT-based) based on the IPSL-ESM-T63 model. Shown are the biome
distributions for the pre-industrial (PI) and Last Glacial Maximum (LGM) time
slices <bold>(a)</bold> and the BNS for all available sites showing the agreement
of the reconstructed biomes (according to the BIOME6000 database) and the
simulated biome distributions in the neighbourhood of the sites <bold>(b)</bold>,
ranging from 0 (no grid cell in the surrounding shows the same biome as
reconstructed) to 1 (the grid cell locating the site and the record at the
site indicate the same biome). Please notice that the FPC method
distinguishes temperate parkland, sclerophyll woodland and boreal parkland,
which all have been assigned to the mega-biome savanna, but savanna is only
defined as tropical savanna in the PFT method.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://cp.copernicus.org/articles/15/335/2019/cp-15-335-2019-f16.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="authorcontribution">

      <p id="d1e4280">All authors contributed to the development of the method. AD
performed the biomisations and prepared the paper. All authors discussed the
analysis and the paper.</p>
  </notes><notes notes-type="competinginterests">

      <p id="d1e4286">The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4292">This work contributes to the project PalMod, funded by the German Federal
Ministry of Education and Research (BMBF), Research for Sustainability
initiative (FONA, <uri>https://www.fona.de</uri>, last access: 8 February 2019).
Anne Dallmeyer was financed by PalMod. We thank Julian Koch (GEUS) for
fruitful discussion on metrics, Jian Ni (ZJNU) and Ulrike Herzschuh (AWI) for
the help on the pollen-based biomisation and Thomas Kleinen (MPI-M) for
performing the CLIMBER and CLIM-LPJ simulations and his helpful comments on
an earlier version of this paper. Many thanks go to Reiner Schnur (MPI-M) for
the technical help. We furthermore would like to acknowledge Dan Zhu (IPSL)
for providing the IPSL-ESM-T63 simulations and the biome data derived by the
FPC-biomisation method. We would like to thank the editor,
Denis-Didier Rousseau, for kindly handling this paper and the three anonymous
referees for their constructive comments which helped to significantly
improve the manuscript.</p><p id="d1e4297">We acknowledge the World Climate Research Programme's Working Group on
Coupled Modelling, which is responsible for CMIP, and we thank the climate
modelling groups (listed in Sect. 2.2 of this paper) for producing and
making available their model output. For CMIP, the US Department of
Energy's Program for Climate Model Diagnosis and Intercomparison provides
coordinating support and led the development of software infrastructure in
partnership with the Global Organization for Earth System Science Portals.
<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
The article processing charges for this open-access <?xmltex \hack{\newline}?> publication were covered by the Max Planck Society.
<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Denis-Didier Rousseau<?xmltex \hack{\newline}?>
Reviewed by: Jed Kaplan and two anonymous referees</p></ack><ref-list>
    <title>References</title>

      <ref id="bib1.bib1"><label>1</label><mixed-citation>Bigelow, N. H., Brubaker, L. B., Edwards, M. E., Harrison, S. P., Prentice,
I. C., Anderson, P. M., Andreev, A. A., Bartlein, P. J., Christensen, T. R.,
Cramer, W., Kaplan, J. O., Lozhkin, A. V., Matveyeva, N. V., Murray, D. F.,
McGuire, A. D., Razzhivin, A. Y., Ritchie, J. C., Smith, B., Walker, D. A.,
Galjewski, K., Wolf, V., Holmquist, B., Igarashi, Y., Kremenetskii, K., Paus,
A., Pisaric, M. F. J., and Volkova, V. S.: Climate change and Arctic
ecosystems – I. Vegetation changes north of 50<inline-formula><mml:math id="M140" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N between the last
glacial maximum, mid-Holocene and present, J. Geophys. Res., 108, 8170,
<ext-link xlink:href="https://doi.org/10.1029/2002JD002558" ext-link-type="DOI">10.1029/2002JD002558</ext-link>, 2003.</mixed-citation></ref>
      <ref id="bib1.bib2"><label>2</label><mixed-citation>
Braconnot, P., Harrison, S. P., Otto-Bliesner, B., Abe-Ouchi, A., Jungclaus,
J., and Peterschmitt, J. Y.: The Paleoclimate Modeling Intercomparison
Project contribution to CMIP5, CLIVAR Exchanges No. 56, 16, 15–19, 2011.</mixed-citation></ref>
      <ref id="bib1.bib3"><label>3</label><mixed-citation>
Brovkin, V., Ganopolski, A., and Svirezhev, Y.: A continuous
climate-vegetation classification for use in climate-biosphere studies,
Ecol. Model., 101, 251–261, 1997.</mixed-citation></ref>
      <ref id="bib1.bib4"><label>4</label><mixed-citation>Calvo, M. and Prentice, I. C.: Effects of fire and <inline-formula><mml:math id="M141" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> on biogeography
and primary production in glacial and modern climates, New Phytol., 208,
987–994, <ext-link xlink:href="https://doi.org/10.1111/nph.13485" ext-link-type="DOI">10.1111/nph.13485</ext-link>, 2015.</mixed-citation></ref>
      <ref id="bib1.bib5"><label>5</label><mixed-citation>
Chen, Y., Ni, J., and Herzschuh, U.: Quantifying modern biomes based on
surface pollen data in China, Global Planet. Change, 74, 114–131, 2010.</mixed-citation></ref>
      <ref id="bib1.bib6"><label>6</label><mixed-citation>
Cohen, J.: A coefficient of agreement for nominal scales, Educ. Psychol.
Meas., 20, 37–46, 1960.</mixed-citation></ref>
      <ref id="bib1.bib7"><label>7</label><mixed-citation>Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,
P., Hinton, T., Hughes, J., Jones, C. D., Joshi, M., Liddicoat, S., Martin,
G., O'Connor, F., Rae, J., Senior, C., Sitch, S., Totterdell, I., Wiltshire,
A., and Woodward, S.: Development and evaluation of an Earth-System model –
HadGEM2, Geosci. Model Dev., 4, 1051–1075,
<ext-link xlink:href="https://doi.org/10.5194/gmd-4-1051-2011" ext-link-type="DOI">10.5194/gmd-4-1051-2011</ext-link>, 2011.</mixed-citation></ref>
      <ref id="bib1.bib8"><label>8</label><mixed-citation>
Cox, P. M.: Description of the TRIFFID dynamic global vegetation model,
Technical note 24, Hadley Centre, Met Office, Exeter, UK, 2001.</mixed-citation></ref>
      <ref id="bib1.bib9"><label>9</label><mixed-citation>
Crucifix, M., Betts, R. A., and Hewitt, C. D.: Pre-industrial potential and
Last Glacial Maximum global vegetation simulated with a coupled
climate-biosphere model: diagnosis of bioclimatic relationships, Global
Planet. Change, 45, 295–312, 2005.</mixed-citation></ref>
      <ref id="bib1.bib10"><label>10</label><mixed-citation>Dallmeyer, A., Claussen, M., Ni, J., Cao, X., Wang, Y., Fischer, N.,
Pfeiffer, M., Jin, L., Khon, V., Wagner, S., Haberkorn, K., and Herzschuh,
U.: Biome changes in Asia since the mid-Holocene – an analysis of different
transient Earth system model simulations, Clim. Past, 13, 107–134,
<ext-link xlink:href="https://doi.org/10.5194/cp-13-107-2017" ext-link-type="DOI">10.5194/cp-13-107-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib11"><label>11</label><mixed-citation>Diffenbaugh, N. S., Sloan, L. C., Snyder, M. A., Bell, J. L., Kaplan, J.,
Shafer, S. L., and Bartlein, P. J.: Vegetation sensitivity to global
anthropogenic carbon dioxide emissions in a topographically complex region,
Global Biogeochem. Cy., 17, 1067,
<ext-link xlink:href="https://doi.org/10.1029/2002GB001974" ext-link-type="DOI">10.1029/2002GB001974</ext-link>, 2003.</mixed-citation></ref>
      <ref id="bib1.bib12"><label>12</label><mixed-citation>Dufresne, J.-L., Foujols, M.-A., Denvil, S., Caubel, A., Marti, O., Aumont, O.,
Balkanski, Y., Bekki, S., Bellenger, H., Benshila, R., Bony, S., Bopp, L.,
Braconnot, P., Brockmann, P., Cadule, P., Cheruy, F., Codron, F., Cozic, A.,
Cugnet, D., de Noblet, N., Duvel, J.-P., Ethé, C., Fairhead, L.,
Fichefet, T., Flavoni, S., Friedlingstein, P., Grandpeix, J.-Y., Guez, L.,
Guilyardi, E., Hauglustaine, D., Hourdin, F., Idelkadi, A., Ghattas, J.,
Joussaume, S., Kageyama, M., Krinner, G., Labetoulle, S., Lahellec, A.,
Lefebvre, M.-P., Lefevre, F., Levy, C., Li, Z. X., Lloyd, J., Lott, F.,
Madec, G., Mancip, M., Marchand, M., Masson, S., Meurdesoif, Y., Mignot, J.,
Musat, I., Parouty, S., Polcher, J., Rio, C., Schulz, M., Swingedouw, D.,
Szopa, S., Talandier, C., Terray, P., Viovy, N., and Vuichard, N.: Climate
change projections using the IPSL-CM5 Earth System Model: from CMIP3 to
CMIP5, Clim. Dynam., 40, 2123, <ext-link xlink:href="https://doi.org/10.1007/s00382-012-1636-1" ext-link-type="DOI">10.1007/s00382-012-1636-1</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib13"><label>13</label><mixed-citation>
Foody, G. M.: Status of land cover classification accuracy assessment, Remote
Sens. Environ., 80, 185–201, 2002.</mixed-citation></ref>
      <?pagebreak page364?><ref id="bib1.bib14"><label>14</label><mixed-citation>Franco, A. C., Rossatto, D. R., de Carvalho Ramos Silva, L., and da Silva
Ferreira, C.: Cerrado vegetation and global change: the role of functional
types, resource availability and disturbance in regulating plant community
responses to rising <inline-formula><mml:math id="M142" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> levels and climate warming, Theor. Exp. Plant
Physiol., 26, 19–38, <ext-link xlink:href="https://doi.org/10.1007/s40626-014-0002-6" ext-link-type="DOI">10.1007/s40626-014-0002-6</ext-link>, 2014.</mixed-citation></ref>
      <ref id="bib1.bib15"><label>15</label><mixed-citation>Gilleland, E., Ahijevych, D., Brown, B. G., Casati, B., and Ebert, E. E.:
Intercomparison of spatial forecast verification methods, Weather Forecast.,  24,
1416–1430, <ext-link xlink:href="https://doi.org/10.1175/2009WAF2222269.1" ext-link-type="DOI">10.1175/2009WAF2222269.1</ext-link>, 2009.</mixed-citation></ref>
      <ref id="bib1.bib16"><label>16</label><mixed-citation>Giorgetta, M. A., Jungclaus, J., Reick, C. H., Legutke, S., Bader, J.,
Böttinger, M., Brovkin, V., Crueger, T., Esch, M., Fieg, K., Glushak,
K., Gayler, V., Haak, H., Hollweg, H.-D., Ilyina, T., Kinne, S., Kornblueh,
L., Matei, D., Mauritsen, T., Mikolajewicz, U., Mueller, W., Notz, D.,
Pithan, F., Raddatz, T., Rast, S., Redler, R., Roeckner, E., Schmidt, H.,
Schnur, R., Segschneider, J., Six, K. D., Stockhause, M., Timmreck, C.,
Wegner, J., Widmann, H., Wieners, K.-H., Claussen, M., Marotzke, J., and
Stevens, B.: Climate and carbon cycle changes from 1850 to 2100 in MPI-ESM
simulations for the Coupled Model Intercomparison Project phase 5, J. Adv.
Model. Earth Syst., 5, 572–597, <ext-link xlink:href="https://doi.org/10.1002/jame.20038" ext-link-type="DOI">10.1002/jame.20038</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib17"><label>17</label><mixed-citation>Guimberteau, M., Zhu, D., Maignan, F., Huang, Y., Yue, C.,
Dantec-Nédélec, S., Ottlé, C., Jornet-Puig, A., Bastos, A.,
Laurent, P., Goll, D., Bowring, S., Chang, J., Guenet, B., Tifafi, M., Peng,
S., Krinner, G., Ducharne, A., Wang, F., Wang, T., Wang, X., Wang, Y., Yin,
Z., Lauerwald, R., Joetzjer, E., Qiu, C., Kim, H., and Ciais, P.:
ORCHIDEE-MICT (v8.4.1), a land surface model for the high latitudes: model
description and validation, Geosci. Model Dev., 11, 121–163,
<ext-link xlink:href="https://doi.org/10.5194/gmd-11-121-2018" ext-link-type="DOI">10.5194/gmd-11-121-2018</ext-link>, 2018.</mixed-citation></ref>
      <ref id="bib1.bib18"><label>18</label><mixed-citation>
Hagen, A.: Fuzzy set approach to assessing similarity of categorical maps,
Int. J. Geogr. Inf. Sci., 17, 235–249, 2003.</mixed-citation></ref>
      <ref id="bib1.bib19"><label>19</label><mixed-citation>
Hagen, A.: An improved Fuzzy Kappa statistic that accounts for spatial
autocorrelation, Int. J. Geogr. Inform. Sci., 23, 61–73, 2009.</mixed-citation></ref>
      <ref id="bib1.bib20"><label>20</label><mixed-citation>Handiani, D., Paul, A., and Dupont, L.: Tropical climate and vegetation
changes during Heinrich Event 1: a model-data comparison, Clim. Past, 8,
37–57, <ext-link xlink:href="https://doi.org/10.5194/cp-8-37-2012" ext-link-type="DOI">10.5194/cp-8-37-2012</ext-link>, 2012.</mixed-citation></ref>
      <ref id="bib1.bib21"><label>21</label><mixed-citation>Handiani, D., Paul, A., Prange, M., Merkel, U., Dupont, L., and Zhang, X.:
Tropical vegetation response to Heinrich Event 1 as simulated with the UVic
ESCM and CCSM3, Clim. Past, 9, 1683–1696,
<ext-link xlink:href="https://doi.org/10.5194/cp-9-1683-2013" ext-link-type="DOI">10.5194/cp-9-1683-2013</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib22"><label>22</label><mixed-citation>Harris, I., Jones, P. D., Osborn, T. J., and Lister, D. H.: Updated
high-resolution grids of monthly climatic observations – the CRU TS3.10
Dataset, Int. J. Climatol., 34, 623–642, <ext-link xlink:href="https://doi.org/10.1002/joc.3711" ext-link-type="DOI">10.1002/joc.3711</ext-link>, 2014.</mixed-citation></ref>
      <ref id="bib1.bib23"><label>23</label><mixed-citation>Harrison, S.: BIOME 6000 DB classified plotfile version 1, University of
Reading, Dataset, <ext-link xlink:href="https://doi.org/10.17864/1947.99" ext-link-type="DOI">10.17864/1947.99</ext-link> , 2017.</mixed-citation></ref>
      <ref id="bib1.bib24"><label>24</label><mixed-citation>
Harrison, S., Bartlein, P. J., and Prentice, C. I.: What have we learnt from
paleoclimate simulations?, J. Quaternary Sci., 31, 363–385, 2016.</mixed-citation></ref>
      <ref id="bib1.bib25"><label>25</label><mixed-citation>Harrison, S. P. and Prentice, I. C.: Climate and <inline-formula><mml:math id="M143" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> controls on global
vegetation distribution at the last glacial maximum: analysis based on
palaeovegetation data, biome modelling and palaeo climate simulations, Glob.
Change Biol., 9, 983–1004, 2003.</mixed-citation></ref>
      <ref id="bib1.bib26"><label>26</label><mixed-citation>Harrison, S. P., Prentice, I. C., Barboni, D., Kohfeld, K., Ni, J., and Sutra,
J.-P.: Ecophysiological and bioclimatic foundations for a global plant
functional classification, J. Veg. Sci., 21, 300–317,
<ext-link xlink:href="https://doi.org/10.1111/j.1654-1103.2009.01144.x" ext-link-type="DOI">10.1111/j.1654-1103.2009.01144.x</ext-link>, 2010.</mixed-citation></ref>
      <ref id="bib1.bib27"><label>27</label><mixed-citation>
Haxeltine, A. and Prentice, C. I.: BIOME3: An equilibrium terrestrial
biosphere model based on ecophysiological constraints, resource
availability, and competition among plant functional types, Global
Biogeochem. Cy., 10, 693–709, 1996.</mixed-citation></ref>
      <ref id="bib1.bib28"><label>28</label><mixed-citation>Hurrell, J. W., Holland, M. M., Gent, P. R., Ghan, S., Kay, J. E., Kushner,
P. J., Lamarque, J., Large, W. G., Lawrence, D., Lindsay, K., Lipscomb, W. H.,
Long, M. C., Mahowald, N., Marsh, D. R., Neale, R. B., Rasch, P., Vavrus, S.,
Vertenstein, M., Bader, D., Collins, W. D., Hack, J. J., Kiehl, J., and
Marshall, S.: The Community Earth System Model: A Framework for
Collaborative Research, B. Am. Meteorol. Soc., 94, 1339–1360, <ext-link xlink:href="https://doi.org/10.1175/BAMS-D-12-00121.1" ext-link-type="DOI">10.1175/BAMS-D-12-00121.1</ext-link>, 2013</mixed-citation></ref>
      <ref id="bib1.bib29"><label>29</label><mixed-citation>
Jacobson Jr., G. L. and Bradshaw, R. H. W.: The selection of sites for
paleovegetational studies, Quateranry Res., 16, 80–96, 1981.</mixed-citation></ref>
      <ref id="bib1.bib30"><label>30</label><mixed-citation>
Jolly, D., Harrison, S. P., Damnati B., and Bonnefille, R.: Simulated climate
and biomes of Africa during the Late Quaternary: comparison with pollen and
lake status data, Quaternary Sci. Rev., 17, 629–657, 1998.</mixed-citation></ref>
      <ref id="bib1.bib31"><label>31</label><mixed-citation>Jones, H. T., Mayle, F. E., Pennington, R. T., and Killeen, T. J.:
Characterisation of Bolivian savanna ecosystems by their modern pollen rain
and implications for fossil pollen records, Rev. Palaeobot. Palyno., 164,
223–237, <ext-link xlink:href="https://doi.org/10.1016/j.revpalbo.2011.01.001" ext-link-type="DOI">10.1016/j.revpalbo.2011.01.001</ext-link>, 2011.</mixed-citation></ref>
      <ref id="bib1.bib32"><label>32</label><mixed-citation>Kageyama, M., Braconnot, P., Bopp, L., Mariotti, V., Roy, T., Woillez, M.-N.,
Caubel, A., Foujols, M.-A., Guilyardi, E., Khodri, M., Lloyd, J., Lombard,
F., and Marti, O.: Mid-Holocene and last glacial maximum climate
simulations with the IPSL model: part II: model-data comparisons, Clim.
Dynam., 40, 2469, <ext-link xlink:href="https://doi.org/10.1007/s00382-012-1499-5" ext-link-type="DOI">10.1007/s00382-012-1499-5</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib33"><label>33</label><mixed-citation>Kaplan, J. O., Bigelow, N. H., Prentice, I. C., Harrison, S. P., Bartlein, P.
J., Christensen, T. R., Cramer, W., Matveyeve, N. V., McGuire, A. D., Murray,
D. F., Razzhivin, V. Y., Smith, B., Walker, D. A., Anderson, P. M., Andreev,
A. A., Brubaker, L. B., Edwards, M. E., and Lozhkin, A. V.: Climate change
and arctic ecosystems: 2. Modeling, paleodata-model comparisons, and future
projections, J. Geophys. Res., 108, 8171, <ext-link xlink:href="https://doi.org/10.1029/2002JD002559" ext-link-type="DOI">10.1029/2002JD002559</ext-link>, 2003.</mixed-citation></ref>
      <ref id="bib1.bib34"><label>34</label><mixed-citation>Kleinen, T., Brovkin, V., von Bloh, W., Archer, D., and Munhoven, G.:
Holocene carbon cycle dynamics, Geophys. Res. Lett., 37, L2705,
<ext-link xlink:href="https://doi.org/10.1029/2009GL041391" ext-link-type="DOI">10.1029/2009GL041391</ext-link>, 2010.</mixed-citation></ref>
      <ref id="bib1.bib35"><label>35</label><mixed-citation>Klockmann, M., Mikolajewicz, U., and Marotzke, J.: The effect of greenhouse
gas concentrations and ice sheets on the glacial AMOC in a coupled climate
model, Clim. Past, 12, 1829–1846, <ext-link xlink:href="https://doi.org/10.5194/cp-12-1829-2016" ext-link-type="DOI">10.5194/cp-12-1829-2016</ext-link>,
2016.</mixed-citation></ref>
      <ref id="bib1.bib36"><label>36</label><mixed-citation>Koch, J., Mendiguren, G., Mariethoz, G., and Stisen, S.: Spatial sensitivity
analysis of simulated land-surface patterns in a catchment model using a set
of innovative spatial performance metrics, J. Hydrometeorol., 18,
1121–1142, <ext-link xlink:href="https://doi.org/10.1175/JHM-D-16-0148.1" ext-link-type="DOI">10.1175/JHM-D-16-0148.1</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib37"><label>37</label><mixed-citation>Krinner, G., Viovy, N., de Noblet-Ducoudre, N., Ogee, J., Polcher, J.,
Friedlingstein, P., Ciais, P., Sitch, S., and Prentice, I. C.: A dynamic
global vegetation model for studies of the coupled atmosphere-biosphere
system, Global Biogeochem. Cy., 19, Gb1015, <ext-link xlink:href="https://doi.org/10.1029/2003gb002199" ext-link-type="DOI">10.1029/2003gb002199</ext-link>, 2005.</mixed-citation></ref>
      <ref id="bib1.bib38"><label>38</label><mixed-citation>
Landis, J. R. and Koch, G. G.: Application of hierarchical Kappa-type
statistics in assessment of majority agreement among multiple observers,
Biometrics, 33, 363–374, 1977.</mixed-citation></ref>
      <?pagebreak page365?><ref id="bib1.bib39"><label>39</label><mixed-citation>Lehmann, C. E. R., Archibald, S. A., Hoffmann, W. A., and Bond, W. J.:
Deciphering the distribution of the savanna biome, New Phytol., 191,
197–209, <ext-link xlink:href="https://doi.org/10.1111/j.1469-8137.2011.03689.x" ext-link-type="DOI">10.1111/j.1469-8137.2011.03689.x</ext-link>, 2011.</mixed-citation></ref>
      <ref id="bib1.bib40"><label>40</label><mixed-citation>Loranty, M. M., Berner, L. T., Goetz, S. J., Jin, Y., and Randerson, J. T.:
Vegetation controls on northern high latitude snow-albedo feedback:
observations and CMIP5 model predictions, Glob. Change Biol., 20, 594–606,
<ext-link xlink:href="https://doi.org/10.1111/gcb.12391" ext-link-type="DOI">10.1111/gcb.12391</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib41"><label>41</label><mixed-citation>Mittermaier, M., Roberts, N., and Thompson, S. A.: A long-term assessment of
precipitation forecast skill using the fractions skill score, Meteor. Appl.,
20, 176–186, <ext-link xlink:href="https://doi.org/10.1002/met.296" ext-link-type="DOI">10.1002/met.296</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib42"><label>42</label><mixed-citation>
Monserud, R. A. and Leemans, R.: Comparing global vegetation maps with the
Kappa statistic, Ecol. Model., 62, 275–293, 1992</mixed-citation></ref>
      <ref id="bib1.bib43"><label>43</label><mixed-citation>
Ni, J., Yu, G., Harrison, S. P., and Prentice, I. C.: Palaeovegetation in
China during the late Quaternary: biome reconstructions based on a global
scheme of plant functional types, Palaeogeogr. Palaeocl., 289, 44–61, 2010.</mixed-citation></ref>
      <ref id="bib1.bib44"><label>44</label><mixed-citation>
Petoukhov, V., Ganopolski, A., Brovkin, V., Claussen, M., Eliseev, A.,
Kubatzki, C., and Rahmstorf, S.: CLIMBER-2: A climate system model of
intermediate complexity, Clim. Dynam., 16, 1–17, 2000.</mixed-citation></ref>
      <ref id="bib1.bib45"><label>45</label><mixed-citation>
Prentice, I. C., Cramer, W., Harrison, S. P., Leemans, R., Monserud, R. A.,
and Solomon, A. M.: A global biome model based on plant physiology and
dominance, soil properties and climate, J. Biogeogr., 19, 117–134, 1992.</mixed-citation></ref>
      <ref id="bib1.bib46"><label>46</label><mixed-citation>
Prentice, I. C., Guiot, J., Huntley, B., Jolly, D., and Cheddadi, R.:
Reconstructing biomes from palaeoecological data: a general method and its
application to European pollen data at 0 and 6 ka, Clim. Dynam., 12,
185–194, 1996.</mixed-citation></ref>
      <ref id="bib1.bib47"><label>47</label><mixed-citation>
Prentice, I. C. and Webb III, T.: BIOME 6000: reconstructing global
mid-Holocene vegetation patterns from palaeoecological records, J. Biogeogr.,
25, 997–1005, 1998.</mixed-citation></ref>
      <ref id="bib1.bib48"><label>48</label><mixed-citation>
Prentice, I. C., Jolly, D., and BIOME 6000 participants: Mid-Holocene and
glacial maximum vegetation geography of the northern continents and Africa,
J. Biogeogr., 27, 507–519, 2000.</mixed-citation></ref>
      <ref id="bib1.bib49"><label>49</label><mixed-citation>
Prentice, I. C, Bondeau, A., Cramer, W., Harrison, S. P., Hickler, T., Lucht,
W., Sitch, S., Smith, B., and Sykes, M.: Dynamic Global Vegetation Modeling:
quantifying terrestrial ecosystem responses to large-scale environmental
change, in: Terrestrial ecosystems in a changing world, edited by: Canadell,
J. G., Pataki, D. E., and Pitelka, L. F., Berlin, Germany, Springer,
175–192, 2007.</mixed-citation></ref>
      <ref id="bib1.bib50"><label>50</label><mixed-citation>
Prentice, I. C., Harrison, S. P., and Bartlein, P. J.: Global vegetation and
terrestrial carbon cycle changes after the last ice age, New Phytol., 189,
988–998, 2011.</mixed-citation></ref>
      <ref id="bib1.bib51"><label>51</label><mixed-citation>
Ramankutty, N. and Foley, J. A.: Estimating historical changes in global land
cover: croplands from 1700 to 1992, Global Biogeochem. Cy., 13, 997–1027,
1999.</mixed-citation></ref>
      <ref id="bib1.bib52"><label>52</label><mixed-citation>Ratnam, J., Bond, W. J., Fensham, R. J., Hoffmann, W. A., Archibald, S.,
Lehmann, C. E. R., Anderson, M. T., Higgins, S. I., and Sankaran, M.: When is
a “forest” a savanna, and why does it matter?, Glob. Ecol. Biogeogr., 20,
653–660, <ext-link xlink:href="https://doi.org/10.1111/j.1466-8238.2010.00634.x" ext-link-type="DOI">10.1111/j.1466-8238.2010.00634.x</ext-link>, 2011.</mixed-citation></ref>
      <ref id="bib1.bib53"><label>53</label><mixed-citation>
Reick, C. H., Raddatz, T., Brovkin, V., and Gayler, V.: Representation of
natural and anthropogenic land cover change in MPI-ESM, J. Adv. Model. Earth
Syst., 5, 459–482, 2013.</mixed-citation></ref>
      <ref id="bib1.bib54"><label>54</label><mixed-citation>Roberts, N. M. and Lean, H. W.: Scale-selective verification of rainfall
accumulations from high-resolution forecasts of convective events, Mon.
Wether Rev., 136, 78–97, <ext-link xlink:href="https://doi.org/10.1175/2007MWR2123.1" ext-link-type="DOI">10.1175/2007MWR2123.1</ext-link>, 2008.</mixed-citation></ref>
      <ref id="bib1.bib55"><label>55</label><mixed-citation>Roche, D. M., Dokken, T. M., Goosse, H., Renssen, H., and Weber, S. L.:
Climate of the Last Glacial Maximum: sensitivity studies and model-data
comparison with the LOVECLIM coupled model, Clim. Past, 3, 205–224,
<ext-link xlink:href="https://doi.org/10.5194/cp-3-205-2007" ext-link-type="DOI">10.5194/cp-3-205-2007</ext-link>, 2007.</mixed-citation></ref>
      <ref id="bib1.bib56"><label>56</label><mixed-citation>Sato, H., Itoh, A., and Kohyama, T.: SEIB-DGVM: A New Dynamic Global
Vegetation Model using a Spatially Explicit Individual-Based Approach, Ecol.
Model., 200, 279–307, <ext-link xlink:href="https://doi.org/10.1016/j.ecolmodel.2006.09.006" ext-link-type="DOI">10.1016/j.ecolmodel.2006.09.006</ext-link>, 2007.</mixed-citation></ref>
      <ref id="bib1.bib57"><label>57</label><mixed-citation>
Scholes, D. and Hall, R.: The carbon budget of tropical savannas; woodlands
and grasslands, in: Global change: effects on; coniferous forests and
grassland, edited by: Breymeyer, A. I., Hall, I. D., Melillo, J. M., and
Agren, G. I., Wiley, New York, 69–100, 1996.</mixed-citation></ref>
      <ref id="bib1.bib58"><label>58</label><mixed-citation>Schurgers, G., Mikolajewicz, U., Groeger, M., Maier-Reimer, E.,Vizcaıno,
M., and Winguth, A.: Dynamics of the terrestrial biosphere, climate and
atmospheric <inline-formula><mml:math id="M144" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration during interglacials: a comparison
between Eemian and Holocene, Clim. Past, 2, 205–220,
<ext-link xlink:href="https://doi.org/10.5194/cp-2-205-2006" ext-link-type="DOI">10.5194/cp-2-205-2006</ext-link>, 2006.</mixed-citation></ref>
      <ref id="bib1.bib59"><label>59</label><mixed-citation>
Sitch, S., Smith, B., Prentice, I. C., Arneth, A., Bondeau, A., Cramer, W.,
Kaplan, J. O., Levis, S., Lucht, W., Sykes, M. T., Thonicke, K., and
Venevsky, S.: Evaluation of ecosystem dynamics, plant geography and
terrestrial carbon cycling in the LPJ dynamic global vegetation model, Glob.
Change Biol., 9, 161–185, 2003.</mixed-citation></ref>
      <ref id="bib1.bib60"><label>60</label><mixed-citation>Sykes, M. T., Prentice, I. C., and Laarif, F.: Quantifying the impact of
global climate change on potential natural vegetation, Climatic Change, 41,
37–52, <ext-link xlink:href="https://doi.org/10.1023/A:1005435831549" ext-link-type="DOI">10.1023/A:1005435831549</ext-link>, 1999.</mixed-citation></ref>
      <ref id="bib1.bib61"><label>61</label><mixed-citation>
Tang, G., Shafer, S. L., Bartlein, P., and Holman, J.: Effects of
experimental protocol on global vegetation model accuracy: a comparison of
simulated and observed vegetation patterns for Asia, Ecol. Model., 220,
1481–1491, 2009.</mixed-citation></ref>
      <ref id="bib1.bib62"><label>62</label><mixed-citation>Taylor, K. E., Stouffer, R. J., and Meehl, G. A.: An Overview of CMIP5 and
the experiment design, B. Am. Meteorol. Soc., 93, 485–498,
<ext-link xlink:href="https://doi.org/10.1175/BAMS-D-11-00094.1" ext-link-type="DOI">10.1175/BAMS-D-11-00094.1</ext-link>, 2012.</mixed-citation></ref>
      <ref id="bib1.bib63"><label>63</label><mixed-citation>Tian, F., Cao, X., Dallmeyer, A., Lohmann, G., Zhang, X., Ni, J., Andreev,
A., Anderson, P., Lozhkin, A., Bezrukova, E., Rudaya, N., Xu, Q., and
Herzschuh, U.: Biome changes and their inferred climatic drivers in northern
and eastern continental Asia at selected times since 40 cal ka bp, Veg.
Hist. Archaeobot., 27, 365–379, <ext-link xlink:href="https://doi.org/10.1007/s00334-017-0653-8" ext-link-type="DOI">10.1007/s00334-017-0653-8</ext-link>, 2018.</mixed-citation></ref>
      <ref id="bib1.bib64"><label>64</label><mixed-citation>Torello-Raventos, M., Feldpausch, T. R., Veenendaal, E., Schrodt, F., Saiz,
G., Domingues, T. F., Djagbletey, G., Ford, A., Kemp, J., Marimon, B. S.,
Hur Marimon Junior, B., Lenza, E., Ratter, J. A., Maracahipes, L., Sasaki,
D., Sonké, B., Zapfack, L., Taedoumg, H., Villarroel, D., Schwarz, M.,
Quesada, C. A., Yoko Ishida, F., Nardoto, G. B., Affum-Baffoe, K., Arroyo,
L., M. J. S. Bowman, D., Compaore, H., Davies, K., Diallo, A., Fyllas, N.
M., Gilpin, M., Hien, F., Johnson, M., Killeen, T. J., Metcalfe, D.,
Miranda, H. S., Steininger, M., Thomson, J., Sykora, K., Mougin, E.,
Hiernaux, P., Bird, M. I., Grace, J., Lewis, S. L., Phillips, O. L., and
Lloyd, J.: On the delineation of tropical vegetation types with an emphasis
on forest/savanna transitions, Plant Ecol. Divers., 6, 101–137,
<ext-link xlink:href="https://doi.org/10.1080/17550874.2012.762812" ext-link-type="DOI">10.1080/17550874.2012.762812</ext-link>, 2013.</mixed-citation></ref>
      <ref id="bib1.bib65"><label>65</label><mixed-citation>University of East Anglia Climatic Research Unit (Jones, P. D. and Harris, I.
C.): Climatic Research Unit (CRU)<?pagebreak page366?> time-series datasets of variations in
climate with variations in other phenomena, NCAS British Atmospheric Data
Centre, available at:
<uri>http://catalogue.ceda.ac.uk/uuid/3f8944800cc48e1cbc29a5ee12d8542d</uri> (last
access: 1 November 2011), 2008.</mixed-citation></ref>
      <ref id="bib1.bib66"><label>66</label><mixed-citation>University of East Anglia Climatic Research Unit (Harris, I. C. and Jones,
P. D.): CRU TS4.00: Climatic Research Unit (CRU) Time-Series (TS) version 4.00
of high-resolution gridded data of month-by-month variation in climate
(January 1901–December 2015), Centre for Environmental Data Analysis,
<ext-link xlink:href="https://doi.org/10.5285/edf8febfdaad48abb2cbaf7d7e846a86" ext-link-type="DOI">10.5285/edf8febfdaad48abb2cbaf7d7e846a86</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib67"><label>67</label><mixed-citation>Watanabe, S., Hajima, T., Sudo, K., Nagashima, T., Takemura, T., Okajima, H.,
Nozawa, T., Kawase, H., Abe, M., Yokohata, T., Ise, T., Sato, H., Kato, E.,
Takata, K., Emori, S., and Kawamiya, M.: MIROC-ESM 2010: model description
and basic results of CMIP5-20c3m experiments, Geosci. Model Dev., 4,
845–872, <ext-link xlink:href="https://doi.org/10.5194/gmd-4-845-2011" ext-link-type="DOI">10.5194/gmd-4-845-2011</ext-link>, 2011</mixed-citation></ref>
      <ref id="bib1.bib68"><label>68</label><mixed-citation>Wohlfahrt, J., Harrison, S. P., Braconnot, P., Hewitt, C. D., Kitoh, A.,
Mikolajewicz, U., Otto-Bliesner, B. L., and Weaver, S. L.: Evaluation of
coupled ocean-atmosphere simulations of the mid-Holocene using
palaeovegetation data from the northern hemisphere extratropics, Clim.
Dynam., 31, 871, <ext-link xlink:href="https://doi.org/10.1007/s00382-008-0415-5" ext-link-type="DOI">10.1007/s00382-008-0415-5</ext-link>, 2008.
</mixed-citation></ref><?xmltex \hack{\newpage}?>
      <ref id="bib1.bib69"><label>69</label><mixed-citation>
Wolff, J. K., Harrold, M., Fowler, T., Gotway, J. H., Nance, L., and Brown,
B. G.: Beyond the basics: Evaluating model-based precipitation forecasts
using traditional, spatial, and object-based methods, Weather Forecast., 29,
1451–1472, 2014.</mixed-citation></ref>
      <ref id="bib1.bib70"><label>70</label><mixed-citation>Zhu, D.: Modeling terrestrial carbon cycle during the Last Glacial Maximum,
Thèse de doctorat Météorologie, océanographie, physique de
l'environnement Paris Saclay 2016, 2016SACLV077, available at:
<uri>http://www.theses.fr/2016SACLV077</uri> (last access: 8 February 2019), 2016.</mixed-citation></ref>
      <ref id="bib1.bib71"><label>71</label><mixed-citation>Zhu, D., Peng, S. S., Ciais, P., Viovy, N., Druel, A., Kageyama, M., Krinner,
G., Peylin, P., Ottlé, C., Piao, S. L., Poulter, B., Schepaschenko, D.,
and Shvidenko, A.: Improving the dynamics of Northern Hemisphere
high-latitude vegetation in the ORCHIDEE ecosystem model, Geosci. Model Dev.,
8, 2263–2283, <ext-link xlink:href="https://doi.org/10.5194/gmd-8-2263-2015" ext-link-type="DOI">10.5194/gmd-8-2263-2015</ext-link>, 2015.</mixed-citation></ref>
      <ref id="bib1.bib72"><label>72</label><mixed-citation>
Zhu, D., Ciais, P., Chang, J., Krinner, G., Peng, S., Viovy, N.,
Peñuelas, J., and Zimov, S.: The large mean body size of mammalian
herbivores explains the productivity paradox during the Last Glacial Maximum,
Nat. Ecol. Evolut., 2, 640–649, 2018.</mixed-citation></ref>

  </ref-list></back>
    <!--<article-title-html>Harmonising  plant functional type distributions for evaluating Earth system models</article-title-html>
<abstract-html><p>Dynamic vegetation models simulate global vegetation in terms of
fractional coverage of a few plant functional types (PFTs). Although these
models often share the same concept, they differ with respect to the number
and kind of PFTs, complicating the comparability of simulated vegetation
distributions. Pollen-based vegetation reconstructions are initially only
available in the form of time series of individual taxa that are not
distinguished in the models. Thus, to evaluate simulated vegetation
distributions, the modelling results and pollen-based vegetation
reconstructions have to be converted into a comparable format. The classical
approach is the method of biomisation, but hitherto PFT-based biomisation
methods were only available for individual models. We introduce and evaluate
a simple, universally applicable technique to harmonise PFT distributions by
assigning them into nine mega-biomes, using only assumptions on the minimum
PFT cover fractions and few bioclimatic constraints (based on the
2&thinsp;m temperature). These constraints mainly follow the limitation rules used in
the classical biome models (here BIOME4). We test the method for six
state-of-the-art dynamic vegetation models that are included in Earth system
models based on pre-industrial, mid-Holocene and Last Glacial Maximum
simulations. The method works well, independent of the spatial resolution or
the complexity of the models. Large biome belts (such as tropical forest) are
generally better represented than regionally confined biomes (warm–temperate
forest, savanna). The comparison with biome distributions inferred via the
classical biomisation approach of forcing biome models (here BIOME1) with
the simulated climate states shows that the PFT-based biomisation is even
able to keep up with the classical method. However, as the new method
considers the PFT distributions actually calculated by the Earth system models, it allows for a direct comparison and evaluation of simulated
vegetation distributions which the classical method cannot do. Thereby, the
new method provides a powerful tool for the evaluation of Earth system models
in general.</p></abstract-html>
<ref-html id="bib1.bib1"><label>1</label><mixed-citation>
Bigelow, N. H., Brubaker, L. B., Edwards, M. E., Harrison, S. P., Prentice,
I. C., Anderson, P. M., Andreev, A. A., Bartlein, P. J., Christensen, T. R.,
Cramer, W., Kaplan, J. O., Lozhkin, A. V., Matveyeva, N. V., Murray, D. F.,
McGuire, A. D., Razzhivin, A. Y., Ritchie, J. C., Smith, B., Walker, D. A.,
Galjewski, K., Wolf, V., Holmquist, B., Igarashi, Y., Kremenetskii, K., Paus,
A., Pisaric, M. F. J., and Volkova, V. S.: Climate change and Arctic
ecosystems – I. Vegetation changes north of 50°&thinsp;N between the last
glacial maximum, mid-Holocene and present, J. Geophys. Res., 108, 8170,
<a href="https://doi.org/10.1029/2002JD002558" target="_blank">https://doi.org/10.1029/2002JD002558</a>, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib2"><label>2</label><mixed-citation>
Braconnot, P., Harrison, S. P., Otto-Bliesner, B., Abe-Ouchi, A., Jungclaus,
J., and Peterschmitt, J. Y.: The Paleoclimate Modeling Intercomparison
Project contribution to CMIP5, CLIVAR Exchanges No. 56, 16, 15–19, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib3"><label>3</label><mixed-citation>
Brovkin, V., Ganopolski, A., and Svirezhev, Y.: A continuous
climate-vegetation classification for use in climate-biosphere studies,
Ecol. Model., 101, 251–261, 1997.
</mixed-citation></ref-html>
<ref-html id="bib1.bib4"><label>4</label><mixed-citation>
Calvo, M. and Prentice, I. C.: Effects of fire and CO<sub>2</sub> on biogeography
and primary production in glacial and modern climates, New Phytol., 208,
987–994, <a href="https://doi.org/10.1111/nph.13485" target="_blank">https://doi.org/10.1111/nph.13485</a>, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib5"><label>5</label><mixed-citation>
Chen, Y., Ni, J., and Herzschuh, U.: Quantifying modern biomes based on
surface pollen data in China, Global Planet. Change, 74, 114–131, 2010.
</mixed-citation></ref-html>
<ref-html id="bib1.bib6"><label>6</label><mixed-citation>
Cohen, J.: A coefficient of agreement for nominal scales, Educ. Psychol.
Meas., 20, 37–46, 1960.
</mixed-citation></ref-html>
<ref-html id="bib1.bib7"><label>7</label><mixed-citation>
Collins, W. J., Bellouin, N., Doutriaux-Boucher, M., Gedney, N., Halloran,
P., Hinton, T., Hughes, J., Jones, C. D., Joshi, M., Liddicoat, S., Martin,
G., O'Connor, F., Rae, J., Senior, C., Sitch, S., Totterdell, I., Wiltshire,
A., and Woodward, S.: Development and evaluation of an Earth-System model –
HadGEM2, Geosci. Model Dev., 4, 1051–1075,
<a href="https://doi.org/10.5194/gmd-4-1051-2011" target="_blank">https://doi.org/10.5194/gmd-4-1051-2011</a>, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib8"><label>8</label><mixed-citation>
Cox, P. M.: Description of the TRIFFID dynamic global vegetation model,
Technical note 24, Hadley Centre, Met Office, Exeter, UK, 2001.
</mixed-citation></ref-html>
<ref-html id="bib1.bib9"><label>9</label><mixed-citation>
Crucifix, M., Betts, R. A., and Hewitt, C. D.: Pre-industrial potential and
Last Glacial Maximum global vegetation simulated with a coupled
climate-biosphere model: diagnosis of bioclimatic relationships, Global
Planet. Change, 45, 295–312, 2005.
</mixed-citation></ref-html>
<ref-html id="bib1.bib10"><label>10</label><mixed-citation>
Dallmeyer, A., Claussen, M., Ni, J., Cao, X., Wang, Y., Fischer, N.,
Pfeiffer, M., Jin, L., Khon, V., Wagner, S., Haberkorn, K., and Herzschuh,
U.: Biome changes in Asia since the mid-Holocene – an analysis of different
transient Earth system model simulations, Clim. Past, 13, 107–134,
<a href="https://doi.org/10.5194/cp-13-107-2017" target="_blank">https://doi.org/10.5194/cp-13-107-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib11"><label>11</label><mixed-citation>
Diffenbaugh, N. S., Sloan, L. C., Snyder, M. A., Bell, J. L., Kaplan, J.,
Shafer, S. L., and Bartlein, P. J.: Vegetation sensitivity to global
anthropogenic carbon dioxide emissions in a topographically complex region,
Global Biogeochem. Cy., 17, 1067,
<a href="https://doi.org/10.1029/2002GB001974" target="_blank">https://doi.org/10.1029/2002GB001974</a>, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib12"><label>12</label><mixed-citation>
Dufresne, J.-L., Foujols, M.-A., Denvil, S., Caubel, A., Marti, O., Aumont, O.,
Balkanski, Y., Bekki, S., Bellenger, H., Benshila, R., Bony, S., Bopp, L.,
Braconnot, P., Brockmann, P., Cadule, P., Cheruy, F., Codron, F., Cozic, A.,
Cugnet, D., de Noblet, N., Duvel, J.-P., Ethé, C., Fairhead, L.,
Fichefet, T., Flavoni, S., Friedlingstein, P., Grandpeix, J.-Y., Guez, L.,
Guilyardi, E., Hauglustaine, D., Hourdin, F., Idelkadi, A., Ghattas, J.,
Joussaume, S., Kageyama, M., Krinner, G., Labetoulle, S., Lahellec, A.,
Lefebvre, M.-P., Lefevre, F., Levy, C., Li, Z. X., Lloyd, J., Lott, F.,
Madec, G., Mancip, M., Marchand, M., Masson, S., Meurdesoif, Y., Mignot, J.,
Musat, I., Parouty, S., Polcher, J., Rio, C., Schulz, M., Swingedouw, D.,
Szopa, S., Talandier, C., Terray, P., Viovy, N., and Vuichard, N.: Climate
change projections using the IPSL-CM5 Earth System Model: from CMIP3 to
CMIP5, Clim. Dynam., 40, 2123, <a href="https://doi.org/10.1007/s00382-012-1636-1" target="_blank">https://doi.org/10.1007/s00382-012-1636-1</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib13"><label>13</label><mixed-citation>
Foody, G. M.: Status of land cover classification accuracy assessment, Remote
Sens. Environ., 80, 185–201, 2002.
</mixed-citation></ref-html>
<ref-html id="bib1.bib14"><label>14</label><mixed-citation>
Franco, A. C., Rossatto, D. R., de Carvalho Ramos Silva, L., and da Silva
Ferreira, C.: Cerrado vegetation and global change: the role of functional
types, resource availability and disturbance in regulating plant community
responses to rising CO<sub>2</sub> levels and climate warming, Theor. Exp. Plant
Physiol., 26, 19–38, <a href="https://doi.org/10.1007/s40626-014-0002-6" target="_blank">https://doi.org/10.1007/s40626-014-0002-6</a>, 2014.
</mixed-citation></ref-html>
<ref-html id="bib1.bib15"><label>15</label><mixed-citation>
Gilleland, E., Ahijevych, D., Brown, B. G., Casati, B., and Ebert, E. E.:
Intercomparison of spatial forecast verification methods, Weather Forecast.,  24,
1416–1430, <a href="https://doi.org/10.1175/2009WAF2222269.1" target="_blank">https://doi.org/10.1175/2009WAF2222269.1</a>, 2009.
</mixed-citation></ref-html>
<ref-html id="bib1.bib16"><label>16</label><mixed-citation>
Giorgetta, M. A., Jungclaus, J., Reick, C. H., Legutke, S., Bader, J.,
Böttinger, M., Brovkin, V., Crueger, T., Esch, M., Fieg, K., Glushak,
K., Gayler, V., Haak, H., Hollweg, H.-D., Ilyina, T., Kinne, S., Kornblueh,
L., Matei, D., Mauritsen, T., Mikolajewicz, U., Mueller, W., Notz, D.,
Pithan, F., Raddatz, T., Rast, S., Redler, R., Roeckner, E., Schmidt, H.,
Schnur, R., Segschneider, J., Six, K. D., Stockhause, M., Timmreck, C.,
Wegner, J., Widmann, H., Wieners, K.-H., Claussen, M., Marotzke, J., and
Stevens, B.: Climate and carbon cycle changes from 1850 to 2100 in MPI-ESM
simulations for the Coupled Model Intercomparison Project phase 5, J. Adv.
Model. Earth Syst., 5, 572–597, <a href="https://doi.org/10.1002/jame.20038" target="_blank">https://doi.org/10.1002/jame.20038</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib17"><label>17</label><mixed-citation>
Guimberteau, M., Zhu, D., Maignan, F., Huang, Y., Yue, C.,
Dantec-Nédélec, S., Ottlé, C., Jornet-Puig, A., Bastos, A.,
Laurent, P., Goll, D., Bowring, S., Chang, J., Guenet, B., Tifafi, M., Peng,
S., Krinner, G., Ducharne, A., Wang, F., Wang, T., Wang, X., Wang, Y., Yin,
Z., Lauerwald, R., Joetzjer, E., Qiu, C., Kim, H., and Ciais, P.:
ORCHIDEE-MICT (v8.4.1), a land surface model for the high latitudes: model
description and validation, Geosci. Model Dev., 11, 121–163,
<a href="https://doi.org/10.5194/gmd-11-121-2018" target="_blank">https://doi.org/10.5194/gmd-11-121-2018</a>, 2018.
</mixed-citation></ref-html>
<ref-html id="bib1.bib18"><label>18</label><mixed-citation>
Hagen, A.: Fuzzy set approach to assessing similarity of categorical maps,
Int. J. Geogr. Inf. Sci., 17, 235–249, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib19"><label>19</label><mixed-citation>
Hagen, A.: An improved Fuzzy Kappa statistic that accounts for spatial
autocorrelation, Int. J. Geogr. Inform. Sci., 23, 61–73, 2009.
</mixed-citation></ref-html>
<ref-html id="bib1.bib20"><label>20</label><mixed-citation>
Handiani, D., Paul, A., and Dupont, L.: Tropical climate and vegetation
changes during Heinrich Event 1: a model-data comparison, Clim. Past, 8,
37–57, <a href="https://doi.org/10.5194/cp-8-37-2012" target="_blank">https://doi.org/10.5194/cp-8-37-2012</a>, 2012.
</mixed-citation></ref-html>
<ref-html id="bib1.bib21"><label>21</label><mixed-citation>
Handiani, D., Paul, A., Prange, M., Merkel, U., Dupont, L., and Zhang, X.:
Tropical vegetation response to Heinrich Event 1 as simulated with the UVic
ESCM and CCSM3, Clim. Past, 9, 1683–1696,
<a href="https://doi.org/10.5194/cp-9-1683-2013" target="_blank">https://doi.org/10.5194/cp-9-1683-2013</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib22"><label>22</label><mixed-citation>
Harris, I., Jones, P. D., Osborn, T. J., and Lister, D. H.: Updated
high-resolution grids of monthly climatic observations – the CRU TS3.10
Dataset, Int. J. Climatol., 34, 623–642, <a href="https://doi.org/10.1002/joc.3711" target="_blank">https://doi.org/10.1002/joc.3711</a>, 2014.
</mixed-citation></ref-html>
<ref-html id="bib1.bib23"><label>23</label><mixed-citation>
Harrison, S.: BIOME 6000 DB classified plotfile version 1, University of
Reading, Dataset, <a href="https://doi.org/10.17864/1947.99" target="_blank">https://doi.org/10.17864/1947.99</a> , 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib24"><label>24</label><mixed-citation>
Harrison, S., Bartlein, P. J., and Prentice, C. I.: What have we learnt from
paleoclimate simulations?, J. Quaternary Sci., 31, 363–385, 2016.
</mixed-citation></ref-html>
<ref-html id="bib1.bib25"><label>25</label><mixed-citation>
Harrison, S. P. and Prentice, I. C.: Climate and CO<sub>2</sub> controls on global
vegetation distribution at the last glacial maximum: analysis based on
palaeovegetation data, biome modelling and palaeo climate simulations, Glob.
Change Biol., 9, 983–1004, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib26"><label>26</label><mixed-citation>
Harrison, S. P., Prentice, I. C., Barboni, D., Kohfeld, K., Ni, J., and Sutra,
J.-P.: Ecophysiological and bioclimatic foundations for a global plant
functional classification, J. Veg. Sci., 21, 300–317,
<a href="https://doi.org/10.1111/j.1654-1103.2009.01144.x" target="_blank">https://doi.org/10.1111/j.1654-1103.2009.01144.x</a>, 2010.
</mixed-citation></ref-html>
<ref-html id="bib1.bib27"><label>27</label><mixed-citation>
Haxeltine, A. and Prentice, C. I.: BIOME3: An equilibrium terrestrial
biosphere model based on ecophysiological constraints, resource
availability, and competition among plant functional types, Global
Biogeochem. Cy., 10, 693–709, 1996.
</mixed-citation></ref-html>
<ref-html id="bib1.bib28"><label>28</label><mixed-citation>
Hurrell, J. W., Holland, M. M., Gent, P. R., Ghan, S., Kay, J. E., Kushner,
P. J., Lamarque, J., Large, W. G., Lawrence, D., Lindsay, K., Lipscomb, W. H.,
Long, M. C., Mahowald, N., Marsh, D. R., Neale, R. B., Rasch, P., Vavrus, S.,
Vertenstein, M., Bader, D., Collins, W. D., Hack, J. J., Kiehl, J., and
Marshall, S.: The Community Earth System Model: A Framework for
Collaborative Research, B. Am. Meteorol. Soc., 94, 1339–1360, <a href="https://doi.org/10.1175/BAMS-D-12-00121.1" target="_blank">https://doi.org/10.1175/BAMS-D-12-00121.1</a>, 2013
</mixed-citation></ref-html>
<ref-html id="bib1.bib29"><label>29</label><mixed-citation>
Jacobson Jr., G. L. and Bradshaw, R. H. W.: The selection of sites for
paleovegetational studies, Quateranry Res., 16, 80–96, 1981.
</mixed-citation></ref-html>
<ref-html id="bib1.bib30"><label>30</label><mixed-citation>
Jolly, D., Harrison, S. P., Damnati B., and Bonnefille, R.: Simulated climate
and biomes of Africa during the Late Quaternary: comparison with pollen and
lake status data, Quaternary Sci. Rev., 17, 629–657, 1998.
</mixed-citation></ref-html>
<ref-html id="bib1.bib31"><label>31</label><mixed-citation>
Jones, H. T., Mayle, F. E., Pennington, R. T., and Killeen, T. J.:
Characterisation of Bolivian savanna ecosystems by their modern pollen rain
and implications for fossil pollen records, Rev. Palaeobot. Palyno., 164,
223–237, <a href="https://doi.org/10.1016/j.revpalbo.2011.01.001" target="_blank">https://doi.org/10.1016/j.revpalbo.2011.01.001</a>, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib32"><label>32</label><mixed-citation>
Kageyama, M., Braconnot, P., Bopp, L., Mariotti, V., Roy, T., Woillez, M.-N.,
Caubel, A., Foujols, M.-A., Guilyardi, E., Khodri, M., Lloyd, J., Lombard,
F., and Marti, O.: Mid-Holocene and last glacial maximum climate
simulations with the IPSL model: part II: model-data comparisons, Clim.
Dynam., 40, 2469, <a href="https://doi.org/10.1007/s00382-012-1499-5" target="_blank">https://doi.org/10.1007/s00382-012-1499-5</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib33"><label>33</label><mixed-citation>
Kaplan, J. O., Bigelow, N. H., Prentice, I. C., Harrison, S. P., Bartlein, P.
J., Christensen, T. R., Cramer, W., Matveyeve, N. V., McGuire, A. D., Murray,
D. F., Razzhivin, V. Y., Smith, B., Walker, D. A., Anderson, P. M., Andreev,
A. A., Brubaker, L. B., Edwards, M. E., and Lozhkin, A. V.: Climate change
and arctic ecosystems: 2. Modeling, paleodata-model comparisons, and future
projections, J. Geophys. Res., 108, 8171, <a href="https://doi.org/10.1029/2002JD002559" target="_blank">https://doi.org/10.1029/2002JD002559</a>, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib34"><label>34</label><mixed-citation>
Kleinen, T., Brovkin, V., von Bloh, W., Archer, D., and Munhoven, G.:
Holocene carbon cycle dynamics, Geophys. Res. Lett., 37, L2705,
<a href="https://doi.org/10.1029/2009GL041391" target="_blank">https://doi.org/10.1029/2009GL041391</a>, 2010.
</mixed-citation></ref-html>
<ref-html id="bib1.bib35"><label>35</label><mixed-citation>
Klockmann, M., Mikolajewicz, U., and Marotzke, J.: The effect of greenhouse
gas concentrations and ice sheets on the glacial AMOC in a coupled climate
model, Clim. Past, 12, 1829–1846, <a href="https://doi.org/10.5194/cp-12-1829-2016" target="_blank">https://doi.org/10.5194/cp-12-1829-2016</a>,
2016.
</mixed-citation></ref-html>
<ref-html id="bib1.bib36"><label>36</label><mixed-citation>
Koch, J., Mendiguren, G., Mariethoz, G., and Stisen, S.: Spatial sensitivity
analysis of simulated land-surface patterns in a catchment model using a set
of innovative spatial performance metrics, J. Hydrometeorol., 18,
1121–1142, <a href="https://doi.org/10.1175/JHM-D-16-0148.1" target="_blank">https://doi.org/10.1175/JHM-D-16-0148.1</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib37"><label>37</label><mixed-citation>
Krinner, G., Viovy, N., de Noblet-Ducoudre, N., Ogee, J., Polcher, J.,
Friedlingstein, P., Ciais, P., Sitch, S., and Prentice, I. C.: A dynamic
global vegetation model for studies of the coupled atmosphere-biosphere
system, Global Biogeochem. Cy., 19, Gb1015, <a href="https://doi.org/10.1029/2003gb002199" target="_blank">https://doi.org/10.1029/2003gb002199</a>, 2005.
</mixed-citation></ref-html>
<ref-html id="bib1.bib38"><label>38</label><mixed-citation>
Landis, J. R. and Koch, G. G.: Application of hierarchical Kappa-type
statistics in assessment of majority agreement among multiple observers,
Biometrics, 33, 363–374, 1977.
</mixed-citation></ref-html>
<ref-html id="bib1.bib39"><label>39</label><mixed-citation>
Lehmann, C. E. R., Archibald, S. A., Hoffmann, W. A., and Bond, W. J.:
Deciphering the distribution of the savanna biome, New Phytol., 191,
197–209, <a href="https://doi.org/10.1111/j.1469-8137.2011.03689.x" target="_blank">https://doi.org/10.1111/j.1469-8137.2011.03689.x</a>, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib40"><label>40</label><mixed-citation>
Loranty, M. M., Berner, L. T., Goetz, S. J., Jin, Y., and Randerson, J. T.:
Vegetation controls on northern high latitude snow-albedo feedback:
observations and CMIP5 model predictions, Glob. Change Biol., 20, 594–606,
<a href="https://doi.org/10.1111/gcb.12391" target="_blank">https://doi.org/10.1111/gcb.12391</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib41"><label>41</label><mixed-citation>
Mittermaier, M., Roberts, N., and Thompson, S. A.: A long-term assessment of
precipitation forecast skill using the fractions skill score, Meteor. Appl.,
20, 176–186, <a href="https://doi.org/10.1002/met.296" target="_blank">https://doi.org/10.1002/met.296</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib42"><label>42</label><mixed-citation>
Monserud, R. A. and Leemans, R.: Comparing global vegetation maps with the
Kappa statistic, Ecol. Model., 62, 275–293, 1992
</mixed-citation></ref-html>
<ref-html id="bib1.bib43"><label>43</label><mixed-citation>
Ni, J., Yu, G., Harrison, S. P., and Prentice, I. C.: Palaeovegetation in
China during the late Quaternary: biome reconstructions based on a global
scheme of plant functional types, Palaeogeogr. Palaeocl., 289, 44–61, 2010.
</mixed-citation></ref-html>
<ref-html id="bib1.bib44"><label>44</label><mixed-citation>
Petoukhov, V., Ganopolski, A., Brovkin, V., Claussen, M., Eliseev, A.,
Kubatzki, C., and Rahmstorf, S.: CLIMBER-2: A climate system model of
intermediate complexity, Clim. Dynam., 16, 1–17, 2000.
</mixed-citation></ref-html>
<ref-html id="bib1.bib45"><label>45</label><mixed-citation>
Prentice, I. C., Cramer, W., Harrison, S. P., Leemans, R., Monserud, R. A.,
and Solomon, A. M.: A global biome model based on plant physiology and
dominance, soil properties and climate, J. Biogeogr., 19, 117–134, 1992.
</mixed-citation></ref-html>
<ref-html id="bib1.bib46"><label>46</label><mixed-citation>
Prentice, I. C., Guiot, J., Huntley, B., Jolly, D., and Cheddadi, R.:
Reconstructing biomes from palaeoecological data: a general method and its
application to European pollen data at 0 and 6&thinsp;ka, Clim. Dynam., 12,
185–194, 1996.
</mixed-citation></ref-html>
<ref-html id="bib1.bib47"><label>47</label><mixed-citation>
Prentice, I. C. and Webb III, T.: BIOME 6000: reconstructing global
mid-Holocene vegetation patterns from palaeoecological records, J. Biogeogr.,
25, 997–1005, 1998.
</mixed-citation></ref-html>
<ref-html id="bib1.bib48"><label>48</label><mixed-citation>
Prentice, I. C., Jolly, D., and BIOME 6000 participants: Mid-Holocene and
glacial maximum vegetation geography of the northern continents and Africa,
J. Biogeogr., 27, 507–519, 2000.
</mixed-citation></ref-html>
<ref-html id="bib1.bib49"><label>49</label><mixed-citation>
Prentice, I. C, Bondeau, A., Cramer, W., Harrison, S. P., Hickler, T., Lucht,
W., Sitch, S., Smith, B., and Sykes, M.: Dynamic Global Vegetation Modeling:
quantifying terrestrial ecosystem responses to large-scale environmental
change, in: Terrestrial ecosystems in a changing world, edited by: Canadell,
J. G., Pataki, D. E., and Pitelka, L. F., Berlin, Germany, Springer,
175–192, 2007.
</mixed-citation></ref-html>
<ref-html id="bib1.bib50"><label>50</label><mixed-citation>
Prentice, I. C., Harrison, S. P., and Bartlein, P. J.: Global vegetation and
terrestrial carbon cycle changes after the last ice age, New Phytol., 189,
988–998, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib51"><label>51</label><mixed-citation>
Ramankutty, N. and Foley, J. A.: Estimating historical changes in global land
cover: croplands from 1700 to 1992, Global Biogeochem. Cy., 13, 997–1027,
1999.
</mixed-citation></ref-html>
<ref-html id="bib1.bib52"><label>52</label><mixed-citation>
Ratnam, J., Bond, W. J., Fensham, R. J., Hoffmann, W. A., Archibald, S.,
Lehmann, C. E. R., Anderson, M. T., Higgins, S. I., and Sankaran, M.: When is
a “forest” a savanna, and why does it matter?, Glob. Ecol. Biogeogr., 20,
653–660, <a href="https://doi.org/10.1111/j.1466-8238.2010.00634.x" target="_blank">https://doi.org/10.1111/j.1466-8238.2010.00634.x</a>, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib53"><label>53</label><mixed-citation>
Reick, C. H., Raddatz, T., Brovkin, V., and Gayler, V.: Representation of
natural and anthropogenic land cover change in MPI-ESM, J. Adv. Model. Earth
Syst., 5, 459–482, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib54"><label>54</label><mixed-citation>
Roberts, N. M. and Lean, H. W.: Scale-selective verification of rainfall
accumulations from high-resolution forecasts of convective events, Mon.
Wether Rev., 136, 78–97, <a href="https://doi.org/10.1175/2007MWR2123.1" target="_blank">https://doi.org/10.1175/2007MWR2123.1</a>, 2008.
</mixed-citation></ref-html>
<ref-html id="bib1.bib55"><label>55</label><mixed-citation>
Roche, D. M., Dokken, T. M., Goosse, H., Renssen, H., and Weber, S. L.:
Climate of the Last Glacial Maximum: sensitivity studies and model-data
comparison with the LOVECLIM coupled model, Clim. Past, 3, 205–224,
<a href="https://doi.org/10.5194/cp-3-205-2007" target="_blank">https://doi.org/10.5194/cp-3-205-2007</a>, 2007.
</mixed-citation></ref-html>
<ref-html id="bib1.bib56"><label>56</label><mixed-citation>
Sato, H., Itoh, A., and Kohyama, T.: SEIB-DGVM: A New Dynamic Global
Vegetation Model using a Spatially Explicit Individual-Based Approach, Ecol.
Model., 200, 279–307, <a href="https://doi.org/10.1016/j.ecolmodel.2006.09.006" target="_blank">https://doi.org/10.1016/j.ecolmodel.2006.09.006</a>, 2007.
</mixed-citation></ref-html>
<ref-html id="bib1.bib57"><label>57</label><mixed-citation>
Scholes, D. and Hall, R.: The carbon budget of tropical savannas; woodlands
and grasslands, in: Global change: effects on; coniferous forests and
grassland, edited by: Breymeyer, A. I., Hall, I. D., Melillo, J. M., and
Agren, G. I., Wiley, New York, 69–100, 1996.
</mixed-citation></ref-html>
<ref-html id="bib1.bib58"><label>58</label><mixed-citation>
Schurgers, G., Mikolajewicz, U., Groeger, M., Maier-Reimer, E.,Vizcaıno,
M., and Winguth, A.: Dynamics of the terrestrial biosphere, climate and
atmospheric CO<sub>2</sub> concentration during interglacials: a comparison
between Eemian and Holocene, Clim. Past, 2, 205–220,
<a href="https://doi.org/10.5194/cp-2-205-2006" target="_blank">https://doi.org/10.5194/cp-2-205-2006</a>, 2006.
</mixed-citation></ref-html>
<ref-html id="bib1.bib59"><label>59</label><mixed-citation>
Sitch, S., Smith, B., Prentice, I. C., Arneth, A., Bondeau, A., Cramer, W.,
Kaplan, J. O., Levis, S., Lucht, W., Sykes, M. T., Thonicke, K., and
Venevsky, S.: Evaluation of ecosystem dynamics, plant geography and
terrestrial carbon cycling in the LPJ dynamic global vegetation model, Glob.
Change Biol., 9, 161–185, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib60"><label>60</label><mixed-citation>
Sykes, M. T., Prentice, I. C., and Laarif, F.: Quantifying the impact of
global climate change on potential natural vegetation, Climatic Change, 41,
37–52, <a href="https://doi.org/10.1023/A:1005435831549" target="_blank">https://doi.org/10.1023/A:1005435831549</a>, 1999.
</mixed-citation></ref-html>
<ref-html id="bib1.bib61"><label>61</label><mixed-citation>
Tang, G., Shafer, S. L., Bartlein, P., and Holman, J.: Effects of
experimental protocol on global vegetation model accuracy: a comparison of
simulated and observed vegetation patterns for Asia, Ecol. Model., 220,
1481–1491, 2009.
</mixed-citation></ref-html>
<ref-html id="bib1.bib62"><label>62</label><mixed-citation>
Taylor, K. E., Stouffer, R. J., and Meehl, G. A.: An Overview of CMIP5 and
the experiment design, B. Am. Meteorol. Soc., 93, 485–498,
<a href="https://doi.org/10.1175/BAMS-D-11-00094.1" target="_blank">https://doi.org/10.1175/BAMS-D-11-00094.1</a>, 2012.
</mixed-citation></ref-html>
<ref-html id="bib1.bib63"><label>63</label><mixed-citation>
Tian, F., Cao, X., Dallmeyer, A., Lohmann, G., Zhang, X., Ni, J., Andreev,
A., Anderson, P., Lozhkin, A., Bezrukova, E., Rudaya, N., Xu, Q., and
Herzschuh, U.: Biome changes and their inferred climatic drivers in northern
and eastern continental Asia at selected times since 40&thinsp;cal&thinsp;ka&thinsp;bp, Veg.
Hist. Archaeobot., 27, 365–379, <a href="https://doi.org/10.1007/s00334-017-0653-8" target="_blank">https://doi.org/10.1007/s00334-017-0653-8</a>, 2018.
</mixed-citation></ref-html>
<ref-html id="bib1.bib64"><label>64</label><mixed-citation>
Torello-Raventos, M., Feldpausch, T. R., Veenendaal, E., Schrodt, F., Saiz,
G., Domingues, T. F., Djagbletey, G., Ford, A., Kemp, J., Marimon, B. S.,
Hur Marimon Junior, B., Lenza, E., Ratter, J. A., Maracahipes, L., Sasaki,
D., Sonké, B., Zapfack, L., Taedoumg, H., Villarroel, D., Schwarz, M.,
Quesada, C. A., Yoko Ishida, F., Nardoto, G. B., Affum-Baffoe, K., Arroyo,
L., M. J. S. Bowman, D., Compaore, H., Davies, K., Diallo, A., Fyllas, N.
M., Gilpin, M., Hien, F., Johnson, M., Killeen, T. J., Metcalfe, D.,
Miranda, H. S., Steininger, M., Thomson, J., Sykora, K., Mougin, E.,
Hiernaux, P., Bird, M. I., Grace, J., Lewis, S. L., Phillips, O. L., and
Lloyd, J.: On the delineation of tropical vegetation types with an emphasis
on forest/savanna transitions, Plant Ecol. Divers., 6, 101–137,
<a href="https://doi.org/10.1080/17550874.2012.762812" target="_blank">https://doi.org/10.1080/17550874.2012.762812</a>, 2013.
</mixed-citation></ref-html>
<ref-html id="bib1.bib65"><label>65</label><mixed-citation>
University of East Anglia Climatic Research Unit (Jones, P. D. and Harris, I.
C.): Climatic Research Unit (CRU) time-series datasets of variations in
climate with variations in other phenomena, NCAS British Atmospheric Data
Centre, available at:
<a href="http://catalogue.ceda.ac.uk/uuid/3f8944800cc48e1cbc29a5ee12d8542d" target="_blank">http://catalogue.ceda.ac.uk/uuid/3f8944800cc48e1cbc29a5ee12d8542d</a> (last
access: 1 November 2011), 2008.
</mixed-citation></ref-html>
<ref-html id="bib1.bib66"><label>66</label><mixed-citation>
University of East Anglia Climatic Research Unit (Harris, I. C. and Jones,
P. D.): CRU TS4.00: Climatic Research Unit (CRU) Time-Series (TS) version 4.00
of high-resolution gridded data of month-by-month variation in climate
(January 1901–December 2015), Centre for Environmental Data Analysis,
<a href="https://doi.org/10.5285/edf8febfdaad48abb2cbaf7d7e846a86" target="_blank">https://doi.org/10.5285/edf8febfdaad48abb2cbaf7d7e846a86</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib67"><label>67</label><mixed-citation>
Watanabe, S., Hajima, T., Sudo, K., Nagashima, T., Takemura, T., Okajima, H.,
Nozawa, T., Kawase, H., Abe, M., Yokohata, T., Ise, T., Sato, H., Kato, E.,
Takata, K., Emori, S., and Kawamiya, M.: MIROC-ESM 2010: model description
and basic results of CMIP5-20c3m experiments, Geosci. Model Dev., 4,
845–872, <a href="https://doi.org/10.5194/gmd-4-845-2011" target="_blank">https://doi.org/10.5194/gmd-4-845-2011</a>, 2011
</mixed-citation></ref-html>
<ref-html id="bib1.bib68"><label>68</label><mixed-citation>
Wohlfahrt, J., Harrison, S. P., Braconnot, P., Hewitt, C. D., Kitoh, A.,
Mikolajewicz, U., Otto-Bliesner, B. L., and Weaver, S. L.: Evaluation of
coupled ocean-atmosphere simulations of the mid-Holocene using
palaeovegetation data from the northern hemisphere extratropics, Clim.
Dynam., 31, 871, <a href="https://doi.org/10.1007/s00382-008-0415-5" target="_blank">https://doi.org/10.1007/s00382-008-0415-5</a>, 2008.

</mixed-citation></ref-html>
<ref-html id="bib1.bib69"><label>69</label><mixed-citation>
Wolff, J. K., Harrold, M., Fowler, T., Gotway, J. H., Nance, L., and Brown,
B. G.: Beyond the basics: Evaluating model-based precipitation forecasts
using traditional, spatial, and object-based methods, Weather Forecast., 29,
1451–1472, 2014.
</mixed-citation></ref-html>
<ref-html id="bib1.bib70"><label>70</label><mixed-citation>
Zhu, D.: Modeling terrestrial carbon cycle during the Last Glacial Maximum,
Thèse de doctorat Météorologie, océanographie, physique de
l'environnement Paris Saclay 2016, 2016SACLV077, available at:
<a href="http://www.theses.fr/2016SACLV077" target="_blank">http://www.theses.fr/2016SACLV077</a> (last access: 8 February 2019), 2016.
</mixed-citation></ref-html>
<ref-html id="bib1.bib71"><label>71</label><mixed-citation>
Zhu, D., Peng, S. S., Ciais, P., Viovy, N., Druel, A., Kageyama, M., Krinner,
G., Peylin, P., Ottlé, C., Piao, S. L., Poulter, B., Schepaschenko, D.,
and Shvidenko, A.: Improving the dynamics of Northern Hemisphere
high-latitude vegetation in the ORCHIDEE ecosystem model, Geosci. Model Dev.,
8, 2263–2283, <a href="https://doi.org/10.5194/gmd-8-2263-2015" target="_blank">https://doi.org/10.5194/gmd-8-2263-2015</a>, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib72"><label>72</label><mixed-citation>
Zhu, D., Ciais, P., Chang, J., Krinner, G., Peng, S., Viovy, N.,
Peñuelas, J., and Zimov, S.: The large mean body size of mammalian
herbivores explains the productivity paradox during the Last Glacial Maximum,
Nat. Ecol. Evolut., 2, 640–649, 2018.
</mixed-citation></ref-html>--></article>
